Gene Information

Name : Asphe3_32030 (Asphe3_32030)
Accession : YP_004242445.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Virulence
Product : ABC-type metal ion transporter periplasmic protein/surface adhesin
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3394117 - 3395037 bp
Length : 921 bp
Strand : -
Note : PFAM: Periplasmic solute binding protein family

DNA sequence : 
ATGGTGCGCTTTAGGGCAGCGGCCGTCGCCGCCGTCGTCCTTTCCCTGCTCTTGACCGCCTGCGGTGGCGGGGCCTCCGG
CAACGGCGGGGACAACAAGAAAGTGGTGCTGACCACGTTCACGGTCCTGGCGGACATCGCGCGGAACGTCGCCGGGGACA
AGCTCACCGTGGAGTCCATCACCAAGGCCGGCGCGGAGATCCATGGCTACGAACCCACGCCCGGCGACATCCGGAAGGCC
TCCAAGGCCGACCTCATCCTAGACAACGGCCTCAACCTTGAGGCCTGGTTCGGCCAGTTCGTGGAAGGCCTGGATGTGCC
CCACGCCGTAGTGAGCGAGGGGGTGGAGCCCATGCCCATCAGCGAGGACTCCTACCAGGGAAAGCCGAACCCGCACGCGT
GGATGTCGCCGGTGAATGTGCAGGTCTATGTGGACAACATGGTCCGCGCCTTCACTGAACTCGATCCGGACAACGCCGCC
GCCTTCAAGGCCAACGGGGATGCTTACAAAGCCGAGCTCCAGGCCGTGCAGGACCAGATGACCACCAGCCTGGCCGTGGT
GCCTGAAGCCCAGCGCGCCCTGGTGACCTGCGAAGGTGCGTTCTCCTACCTGGCCCGTGACGCCGGGCTCAAGGAGGTCT
ACATCTGGGCAGTGAACGCGGAGCAGCAGGCCACGCCCCAGCAGATCACCCGGGCCATCGAGTACGTAAAGGCCAACAAA
GTCCCGGCCGTCTTCTGTGAGTCCACTGTTTCCAACGCCCCCATGCAGCAGGTGTTGGAAGCCACGGGCGCACGCTTTGG
CGGCACACTGTACGTGGACTCGCTGTCCGAGGCGGACGGGCCCGTGCCCACCTACCTGGACCTGATCCGGCACGACGCCG
AGACCATCACCAAGGCGCTCACCGCGGGGGTTGGGCCATGA

Protein sequence : 
MVRFRAAAVAAVVLSLLLTACGGGASGNGGDNKKVVLTTFTVLADIARNVAGDKLTVESITKAGAEIHGYEPTPGDIRKA
SKADLILDNGLNLEAWFGQFVEGLDVPHAVVSEGVEPMPISEDSYQGKPNPHAWMSPVNVQVYVDNMVRAFTELDPDNAA
AFKANGDAYKAELQAVQDQMTTSLAVVPEAQRALVTCEGAFSYLARDAGLKEVYIWAVNAEQQATPQQITRAIEYVKANK
VPAVFCESTVSNAPMQQVLEATGARFGGTLYVDSLSEADGPVPTYLDLIRHDAETITKALTAGVGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-75 57
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-75 57
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-75 57
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-75 57
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-75 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_32030 YP_004242445.1 ABC-type metal ion transporter periplasmic protein/surface adhesin BAC0349 Protein 3e-75 57
Asphe3_32030 YP_004242445.1 ABC-type metal ion transporter periplasmic protein/surface adhesin BAC0439 Protein 3e-70 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Asphe3_32030 YP_004242445.1 ABC-type metal ion transporter periplasmic protein/surface adhesin VFG0525 Protein 2e-75 57