Gene Information

Name : Asphe3_26820 (Asphe3_26820)
Accession : YP_004241936.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Unknown
Product : ABC-type oligopeptide transporter periplasmic protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 2860794 - 2862464 bp
Length : 1671 bp
Strand : -
Note : PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle

DNA sequence :
ATGCGTTTTACGCGCACTTCCAAAGCACTGGGCATCGTGGCAATCGCCGCGCTCGCCCTGACCGGCTGCGGCGCTGGAGG
CGGCAGCACTGACGGAGCCAGCGACGCCGCCGGCGACCCGAACAAGGTCATCACCGCCTACAGCAACGAGCCACAGAACC
CGTTGCTGCCGGCCAACACCAACGAAGTCTATGGCGGCCGCGTTGTCGAGCTGCTGTTCGAAGGCCTGACCAGCTACAGC
CCCAGCGGCGAGTCGGTCAACGCCCTCGCCGAGTCCATTGAGTCGCCGGACGGACAGAACTACACCATCAAGGTCAAGAG
CGGCACCAAGTTCACCAACGGTGAGGAAGTCACCGCCAAGAGCTTCGTCGACGCCTGGAACTTTGCGGCCCTGAGCACCA
ACGCCCAGGCCAACAGCAGCTTCTTTGAGTCCATCGAGGGCTATGACGCAGTCAGCGCCACCAAGAAGGAAGGCGACACA
GAGGTCCCTGCCCCCACGGCGCAGACCCTGTCCGGCCTGGTCCTGAAGGACGACACCACCATTGAGGTCAAGCTGGCCCA
GCCGGAAGCCGACTGGCCGCTGCGCCTCGGCTACACCGCCTTCATGCCGCTTCCGTCCCAGGCCATTGCCGATCCCAAGG
CCTACGGCGAAAACCCGGTGGGCAACGGCCCTTACAAGATGGCCAAGGAAGGCGCCTGGCAGCACGACAGCCAGATTGAA
CTCGTCAAGAACGAGGACTACTCCGGCACCCGCGAAGCCAAGAACGGCGGCGTGACCTTCAAGTTCTACACCGATCCGGC
TCCGGCCTACACCGACATCCAGGCCAACAACCTGGACGTGACGGACGTTCTTCCCACCAACGCCTTGAAGACCTACACCA
CGGACTTCCCGGAGAACCACCTGAACAAGCCGTACGCAGGCAACTCCACGCTGAACATCCCGGGCTACCTGCCCGAGTTC
CAGGGTGAGGCCGGCAAGCTGCGCCGCCAGGCCATCTCCATGGCAATCAACCGCGACGAGATCACCAAGGTCATCTTCAG
CGGCACCCGCATCCCGGCCAAGGACTTCACCTCCCCGGCTGTGGACGGCTACAACGAAAACGTCGAAGGTTCCGAGGTCC
TGAAGTTCGACGCCGCCAAGGCCAAGGAAACCTGGGAGAAGGCCAACGCCATCACCCCGTGGCCCGCCGACAAGACGCTG
CAGCTCGCCTACAACACTGACGGTGGCAACAAGGAATGGATCGACGCCGTTGCCAACAACCTGAAGAACAACCTGGGCAT
CCAGGCCGAGGGCCAGCCCTTCGCCAAGTTCGCCGAGCTCCTGGACCTGCGTAAGTCCAAGACCCTCCCCGGCGCCGCCC
GCGCCGGATGGCAGGCTGACTACCCGTCGCTGTACAACTTCCTCGGCCCGCTCCTGAGGACCGGTGCCAGCGCCAACTAC
GAGGGCTACTCCAACCCTGAGTTCGACAAGCTCCTCGACGAAGGCCTGGGCTCGAAGTCCACGGACGACGCCAACGCGAA
GTTCACCGAGGCGCAGGAACTCCTGTTCCAGGACCTGCCCAACCTCCCGCTGTGGTACTCCGCACGCCAGGTCGTGTGGA
GCCAGAACGTCACCAACGTGGACAGCGGCTGGAACGGCGTCATTCAGTACTACAACATCACCGCAAAGTAG

Protein sequence :
MRFTRTSKALGIVAIAALALTGCGAGGGSTDGASDAAGDPNKVITAYSNEPQNPLLPANTNEVYGGRVVELLFEGLTSYS
PSGESVNALAESIESPDGQNYTIKVKSGTKFTNGEEVTAKSFVDAWNFAALSTNAQANSSFFESIEGYDAVSATKKEGDT
EVPAPTAQTLSGLVLKDDTTIEVKLAQPEADWPLRLGYTAFMPLPSQAIADPKAYGENPVGNGPYKMAKEGAWQHDSQIE
LVKNEDYSGTREAKNGGVTFKFYTDPAPAYTDIQANNLDVTDVLPTNALKTYTTDFPENHLNKPYAGNSTLNIPGYLPEF
QGEAGKLRRQAISMAINRDEITKVIFSGTRIPAKDFTSPAVDGYNENVEGSEVLKFDAAKAKETWEKANAITPWPADKTL
QLAYNTDGGNKEWIDAVANNLKNNLGIQAEGQPFAKFAELLDLRKSKTLPGAARAGWQADYPSLYNFLGPLLRTGASANY
EGYSNPEFDKLLDEGLGSKSTDDANAKFTEAQELLFQDLPNLPLWYSARQVVWSQNVTNVDSGWNGVIQYYNITAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 2e-107 50