Gene Information

Name : Asphe3_20440 (Asphe3_20440)
Accession : YP_004241333.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2197826 - 2198815 bp
Length : 990 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
ATGGCATCTGCGTGCCGCCCTGCACCCCCGGCGAAGGTCATCTATCTACCCATAGGGGTTTTTGTGTCTACACCTGATGT
AAGCAGCGAAGCCGGTTCGTCCGCGAACAGCGTCACGGGCAGCAACCGCGTCAAGCGCGGTATGGCTGAGATGCTCAAGG
GCGGCGTCATCATGGACGTCGTCAACGTCGAACAGGCCCGCATCGCCGAAGACGCCGGTGCCGTTGCCGTGATGGCGCTG
GAACGCGTTCCGGCCGATATCCGCGCCCAGGGCGGCGTCTCCCGCATGTCCGATCCGGACATGATCGACCAGATCATCGA
CGCCGTGTCCATCCCGGTGATGGCCAAGGCCCGGATCGGCCACTTCGTCGAAGCCCAGGTCCTGCAGTCCCTCGGCGTGG
ACTACATTGACGAGTCCGAGGTCCTCACCCCTGCGGACTACGTCAACCACATCGACAAGTGGAACTTCAAGGTTCCCTTC
GTCTGCGGCGCCACCAACCTGGGTGAGGCGCTGCGCCGCATCAACGAGGGCGCGGCCATGATCCGCTCCAAGGGCGAGGC
CGGCACCGGCGACGTCTCCAACGCCACCGGGCACATGCGCCAGATCCGCTCCGAGATCGCCAAGCTGGCAGCCCTGCCCG
AGGACGAGCTGTACGTCGCGGCCAAGGAACTGCAGGCCCCGTACGAACTGGTCAAGGAAGTCGCCGCTGCCGGCAAGCTT
CCCGTGGTGCTGTTCACCGCCGGCGGCATCGCCACCCCGGCTGATGCTGCCATGATGATGCAGCTCGGCGCTGACGGCGT
ATTCGTCGGCTCGGGCATCTTCAAGTCCGGCAACCCGGCCCAGCGTGCCGCCGCCGTCGTGAAGGCCACCACCTTCTTCG
ATGACCCCGATGTCATCGCCAAGGCCTCCCGCGGCCTGGGCGAAGCCATGGTGGGCATCAACGTCGACGAGATCCCCCAG
CCCCACCGCCTCGCCGAGCGCGGCTGGTAA

Protein sequence :
MASACRPAPPAKVIYLPIGVFVSTPDVSSEAGSSANSVTGSNRVKRGMAEMLKGGVIMDVVNVEQARIAEDAGAVAVMAL
ERVPADIRAQGGVSRMSDPDMIDQIIDAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPADYVNHIDKWNFKVPF
VCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATGHMRQIRSEIAKLAALPEDELYVAAKELQAPYELVKEVAAAGKL
PVVLFTAGGIATPADAAMMMQLGADGVFVGSGIFKSGNPAQRAAAVVKATTFFDDPDVIAKASRGLGEAMVGINVDEIPQ
PHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-115 80
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-115 80
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-115 80