Gene Information

Name : Asphe3_12840 (Asphe3_12840)
Accession : YP_004240595.1
Strain : Arthrobacter phenanthrenivorans Sphe3
Genome accession: NC_015145
Putative virulence/resistance : Unknown
Product : RND superfamily drug exporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG2409
EC number : -
Position : 1361229 - 1363763 bp
Length : 2535 bp
Strand : -
Note : PFAM: MMPL family

DNA sequence :
ATGGCACTGTTCCTTTACCGCCTGGGCAAGTTCTCCTACCGCCGCCGCTGGCTGGTGATCTCGCTGTGGCTTGCCGCCCT
CCTGGCCGTCGGTGGCGCAGCAGCCGCCTTCCACGGCACCCTGTCCAACAACTTCCAGATCCCGGGCACGGAGACCCAGC
GGATCGCGGACAAGCTCAAGGAAGAGCTTCCTTCAGCATCCGGAGGCACCGCGACCATCGTCTTTGAGGCCCCCGACGGC
GGATTCACGGCGGAGAGCCGGGCGGCCGTCACTGACGCGCTGGAGAAGCTCGAGACCGTCCCCGATGTCCGCGGCACCGT
AGACCCCTTTGCCACGCAGGCGCAGGTGGACCAGGCCGAACAGGCAATTACCGACGGCGAGCAGCAGCTTGCCGCAGGCC
AGGCACAGCTGGATGCCTCCCGGGCCCAGCTTGAAGCCGGCAAGGCACAGCTGGACGCAGCGGAACAGCAGCTCGCGGCC
GCCGGTGCCCCTGCCGCCCTCGTGGAGGCACAGCTGGGGCAGCAGAAAGCCGCCCTGGCTGAGGGGCAGGCGAAGCTCGA
CGCCGGAGCGCTGGAACTTGAAGCCAACAAAGCAAAGCTCGAACTGGGCAAACGGCAGGCAGAGGCCTCCTCGGCCATCC
GCTTCGTGTCCGAAGATGGCCGGGCCGCCGTGGCGCAGGTGCAGTTCAACACGTCGATCAACGGTTTGAGCACGGAGGTG
CGCCAGCAGGTCCAGGACATCGCCCACGAAACCTCCGCTGCCGGCGTCACCGCCTACGCCAGCAAGGAGATCACCGAGGA
CATCTCGGAACTCTTCGGCGCCGCGGAAATCATCGGCATCGCCGTCGCGGCCCTGGTCCTGATCATCATGCTGGGAACCC
TCATCGCAGCAGGGCTGCCGCTGTTGATGGCCATAGTAGGAGTGGGCGTCGGCGTCGGCATCACCTTCGCGCTGTCCGGC
TTGTTCGACATGAGCTCCATCTCCCCCATGCTGGCCCTGATGCTCGGCCTGGCCGTGGGCATCGACTACTCCCTCTTCAT
TGTGAACCGGCACCGGACGCAGCTGCTGGCCGGAATGGATCCGGAGCAATCCGTTGCCCGGGCCACCGGCACGTCCGGCA
ACGCAGTGGTGTTCGCCGGCCTGACCGTAATCATCGCCCTGGCCGCCCTGGTGGTCCCCGGGCTGCCGTTCCTGACCGTC
ATGGGCCTGGCCGCCGCCGGAACCGTGGCCGTGGCGGTCCTGGTGGCCATCACCCTGACACCGGCCATGCTGTCGCTGAT
CGGCCGCCGCATCATTTCGCGCCGCGCCTGGGCCAAGGCTGATGCCCACAACGCCGAACCGGGCCACGAAGCAGCCGATG
CAGCCAAGGACCGCGAGCGCAGCACCCACGGCTGGGGCGGCCTGGTCACCCGGCACCCCATCCTGGCACTCCTTGCCGGC
GTGCTCCTGCTGGGCACCCTCGCGCTGCCTGCCACCCAGCTGCAGCTTGCACTGCCGGACGGCGGGTCCGAACCGGTGGA
CTCCGAGGCCTACCAGGCGTACGACCTGACTGCACGCAGCTTCGGCGAAGGCGTCACCGGCCCCGTCGTGGCGGTGGGCG
AGTTCCCCGCCGGGCTGGACGAGGCCCAGGCCCAAACCCTGCAGTACGACGTTGCCGACAAGCTCCGCGCCGTGGACAAC
GTGGTGGCCGCCGTGCCGGTTGCCCTGAGCGAGGACCGCCGGACTGCCGTCTTCCAAGTCATCCCCCGGGAGGGCCCGGC
CAGCGCCAGCACCGTCCAGGTGGTTTCTGAGCTTCGCGGCCTGAACGACGAAATCCAGTCCGAGTACGGGGTGGCGATGG
GACTGACGGGGCAGACCGCCGGAAACATTGATGTCTCCACCAAGCTCGGTGACGCCCTGCCGCCCTACCTGGCCATCGTC
GTCGGCCTTTCCCTGATCCTCCTGCTGCTGGTGTTCCGCTCCATCGTGGTGCCCCTGCTCGCCACCGGCGGGTTCCTGCT
CTCCCTGGCTGCCGCGTTCGGCGCCGTGGTGGCCGTGTACCAGTGGGGCTGGCTGGGCAACGTGTTCGACGTCGCCAACC
CCGGCGCCGTCCTCAGCTTCCTGCCGATCATCCTGATCGGTGTGCTGTTCGGCCTTGCCATGGACTACCAGGTGTTCATT
GCCTCCGGCATGCGCGAGGCCTACATGCACGGGTCCGCGGCCAAGGAAGCAGTGCGGGTGGGATTCAGCCACGCCGCCGC
CGTGGTGACTGCCGCAGCGATCATCATGGTCAGCGTCTTTGCCGGCTTCATCTTCAGCCACCTCACCATGGTCCGGCCGC
TGGGCTTCGCCATGGCATTCGGCGTGCTCCTGGACGCCTTCGTGGTCCGCATGACGATTGTGCCCGCCGTCATGTACCTG
CTGGGCAAAAAGTCCTGGTGGCTCCCCCGCTGGCTGGACCGGATCCTGCCGGACGTGGACGTGGAGGGTGCCCAGCTGGC
GAAGCTGGACAGCGGCCATGCCAGGCACGCCAAAGCGGCCGAGCCGGTCCATTAG

Protein sequence :
MALFLYRLGKFSYRRRWLVISLWLAALLAVGGAAAAFHGTLSNNFQIPGTETQRIADKLKEELPSASGGTATIVFEAPDG
GFTAESRAAVTDALEKLETVPDVRGTVDPFATQAQVDQAEQAITDGEQQLAAGQAQLDASRAQLEAGKAQLDAAEQQLAA
AGAPAALVEAQLGQQKAALAEGQAKLDAGALELEANKAKLELGKRQAEASSAIRFVSEDGRAAVAQVQFNTSINGLSTEV
RQQVQDIAHETSAAGVTAYASKEITEDISELFGAAEIIGIAVAALVLIIMLGTLIAAGLPLLMAIVGVGVGVGITFALSG
LFDMSSISPMLALMLGLAVGIDYSLFIVNRHRTQLLAGMDPEQSVARATGTSGNAVVFAGLTVIIALAALVVPGLPFLTV
MGLAAAGTVAVAVLVAITLTPAMLSLIGRRIISRRAWAKADAHNAEPGHEAADAAKDRERSTHGWGGLVTRHPILALLAG
VLLLGTLALPATQLQLALPDGGSEPVDSEAYQAYDLTARSFGEGVTGPVVAVGEFPAGLDEAQAQTLQYDVADKLRAVDN
VVAAVPVALSEDRRTAVFQVIPREGPASASTVQVVSELRGLNDEIQSEYGVAMGLTGQTAGNIDVSTKLGDALPPYLAIV
VGLSLILLLLVFRSIVVPLLATGGFLLSLAAAFGAVVAVYQWGWLGNVFDVANPGAVLSFLPIILIGVLFGLAMDYQVFI
ASGMREAYMHGSAAKEAVRVGFSHAAAVVTAAAIIMVSVFAGFIFSHLTMVRPLGFAMAFGVLLDAFVVRMTIVPAVMYL
LGKKSWWLPRWLDRILPDVDVEGAQLAKLDSGHARHAKAAEPVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0093 YP_001220832.1 RND family transporter Not tested chp/tomA region Protein 2e-60 43
cur_1489 YP_001800883.1 RND superfamily drug exporter Not tested Not named Protein 3e-53 42