Name : Asphe3_12840 (Asphe3_12840) Accession : YP_004240595.1 Strain : Arthrobacter phenanthrenivorans Sphe3 Genome accession: NC_015145 Putative virulence/resistance : Unknown Product : RND superfamily drug exporter Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 1361229 - 1363763 bp Length : 2535 bp Strand : - Note : PFAM: MMPL family DNA sequence : ATGGCACTGTTCCTTTACCGCCTGGGCAAGTTCTCCTACCGCCGCCGCTGGCTGGTGATCTCGCTGTGGCTTGCCGCCCT CCTGGCCGTCGGTGGCGCAGCAGCCGCCTTCCACGGCACCCTGTCCAACAACTTCCAGATCCCGGGCACGGAGACCCAGC GGATCGCGGACAAGCTCAAGGAAGAGCTTCCTTCAGCATCCGGAGGCACCGCGACCATCGTCTTTGAGGCCCCCGACGGC GGATTCACGGCGGAGAGCCGGGCGGCCGTCACTGACGCGCTGGAGAAGCTCGAGACCGTCCCCGATGTCCGCGGCACCGT AGACCCCTTTGCCACGCAGGCGCAGGTGGACCAGGCCGAACAGGCAATTACCGACGGCGAGCAGCAGCTTGCCGCAGGCC AGGCACAGCTGGATGCCTCCCGGGCCCAGCTTGAAGCCGGCAAGGCACAGCTGGACGCAGCGGAACAGCAGCTCGCGGCC GCCGGTGCCCCTGCCGCCCTCGTGGAGGCACAGCTGGGGCAGCAGAAAGCCGCCCTGGCTGAGGGGCAGGCGAAGCTCGA CGCCGGAGCGCTGGAACTTGAAGCCAACAAAGCAAAGCTCGAACTGGGCAAACGGCAGGCAGAGGCCTCCTCGGCCATCC GCTTCGTGTCCGAAGATGGCCGGGCCGCCGTGGCGCAGGTGCAGTTCAACACGTCGATCAACGGTTTGAGCACGGAGGTG CGCCAGCAGGTCCAGGACATCGCCCACGAAACCTCCGCTGCCGGCGTCACCGCCTACGCCAGCAAGGAGATCACCGAGGA CATCTCGGAACTCTTCGGCGCCGCGGAAATCATCGGCATCGCCGTCGCGGCCCTGGTCCTGATCATCATGCTGGGAACCC TCATCGCAGCAGGGCTGCCGCTGTTGATGGCCATAGTAGGAGTGGGCGTCGGCGTCGGCATCACCTTCGCGCTGTCCGGC TTGTTCGACATGAGCTCCATCTCCCCCATGCTGGCCCTGATGCTCGGCCTGGCCGTGGGCATCGACTACTCCCTCTTCAT TGTGAACCGGCACCGGACGCAGCTGCTGGCCGGAATGGATCCGGAGCAATCCGTTGCCCGGGCCACCGGCACGTCCGGCA ACGCAGTGGTGTTCGCCGGCCTGACCGTAATCATCGCCCTGGCCGCCCTGGTGGTCCCCGGGCTGCCGTTCCTGACCGTC ATGGGCCTGGCCGCCGCCGGAACCGTGGCCGTGGCGGTCCTGGTGGCCATCACCCTGACACCGGCCATGCTGTCGCTGAT CGGCCGCCGCATCATTTCGCGCCGCGCCTGGGCCAAGGCTGATGCCCACAACGCCGAACCGGGCCACGAAGCAGCCGATG CAGCCAAGGACCGCGAGCGCAGCACCCACGGCTGGGGCGGCCTGGTCACCCGGCACCCCATCCTGGCACTCCTTGCCGGC GTGCTCCTGCTGGGCACCCTCGCGCTGCCTGCCACCCAGCTGCAGCTTGCACTGCCGGACGGCGGGTCCGAACCGGTGGA CTCCGAGGCCTACCAGGCGTACGACCTGACTGCACGCAGCTTCGGCGAAGGCGTCACCGGCCCCGTCGTGGCGGTGGGCG AGTTCCCCGCCGGGCTGGACGAGGCCCAGGCCCAAACCCTGCAGTACGACGTTGCCGACAAGCTCCGCGCCGTGGACAAC GTGGTGGCCGCCGTGCCGGTTGCCCTGAGCGAGGACCGCCGGACTGCCGTCTTCCAAGTCATCCCCCGGGAGGGCCCGGC CAGCGCCAGCACCGTCCAGGTGGTTTCTGAGCTTCGCGGCCTGAACGACGAAATCCAGTCCGAGTACGGGGTGGCGATGG GACTGACGGGGCAGACCGCCGGAAACATTGATGTCTCCACCAAGCTCGGTGACGCCCTGCCGCCCTACCTGGCCATCGTC GTCGGCCTTTCCCTGATCCTCCTGCTGCTGGTGTTCCGCTCCATCGTGGTGCCCCTGCTCGCCACCGGCGGGTTCCTGCT CTCCCTGGCTGCCGCGTTCGGCGCCGTGGTGGCCGTGTACCAGTGGGGCTGGCTGGGCAACGTGTTCGACGTCGCCAACC CCGGCGCCGTCCTCAGCTTCCTGCCGATCATCCTGATCGGTGTGCTGTTCGGCCTTGCCATGGACTACCAGGTGTTCATT GCCTCCGGCATGCGCGAGGCCTACATGCACGGGTCCGCGGCCAAGGAAGCAGTGCGGGTGGGATTCAGCCACGCCGCCGC CGTGGTGACTGCCGCAGCGATCATCATGGTCAGCGTCTTTGCCGGCTTCATCTTCAGCCACCTCACCATGGTCCGGCCGC TGGGCTTCGCCATGGCATTCGGCGTGCTCCTGGACGCCTTCGTGGTCCGCATGACGATTGTGCCCGCCGTCATGTACCTG CTGGGCAAAAAGTCCTGGTGGCTCCCCCGCTGGCTGGACCGGATCCTGCCGGACGTGGACGTGGAGGGTGCCCAGCTGGC GAAGCTGGACAGCGGCCATGCCAGGCACGCCAAAGCGGCCGAGCCGGTCCATTAG Protein sequence : MALFLYRLGKFSYRRRWLVISLWLAALLAVGGAAAAFHGTLSNNFQIPGTETQRIADKLKEELPSASGGTATIVFEAPDG GFTAESRAAVTDALEKLETVPDVRGTVDPFATQAQVDQAEQAITDGEQQLAAGQAQLDASRAQLEAGKAQLDAAEQQLAA AGAPAALVEAQLGQQKAALAEGQAKLDAGALELEANKAKLELGKRQAEASSAIRFVSEDGRAAVAQVQFNTSINGLSTEV RQQVQDIAHETSAAGVTAYASKEITEDISELFGAAEIIGIAVAALVLIIMLGTLIAAGLPLLMAIVGVGVGVGITFALSG LFDMSSISPMLALMLGLAVGIDYSLFIVNRHRTQLLAGMDPEQSVARATGTSGNAVVFAGLTVIIALAALVVPGLPFLTV MGLAAAGTVAVAVLVAITLTPAMLSLIGRRIISRRAWAKADAHNAEPGHEAADAAKDRERSTHGWGGLVTRHPILALLAG VLLLGTLALPATQLQLALPDGGSEPVDSEAYQAYDLTARSFGEGVTGPVVAVGEFPAGLDEAQAQTLQYDVADKLRAVDN VVAAVPVALSEDRRTAVFQVIPREGPASASTVQVVSELRGLNDEIQSEYGVAMGLTGQTAGNIDVSTKLGDALPPYLAIV VGLSLILLLLVFRSIVVPLLATGGFLLSLAAAFGAVVAVYQWGWLGNVFDVANPGAVLSFLPIILIGVLFGLAMDYQVFI ASGMREAYMHGSAAKEAVRVGFSHAAAVVTAAAIIMVSVFAGFIFSHLTMVRPLGFAMAFGVLLDAFVVRMTIVPAVMYL LGKKSWWLPRWLDRILPDVDVEGAQLAKLDSGHARHAKAAEPVH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 2e-60 | 43 |
cur_1489 | YP_001800883.1 | RND superfamily drug exporter | Not tested | Not named | Protein | 3e-53 | 42 |