Gene Information

Name : Weevi_0467 (Weevi_0467)
Accession : YP_004237764.1
Strain : Weeksella virosa DSM 16922
Genome accession: NC_015144
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0491
EC number : -
Position : 468894 - 469766 bp
Length : 873 bp
Strand : -
Note : COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: ttr:Tter_2723 beta-lactamase domain protein; PFAM: beta-lactamase-like; SMART: beta-lactamase-like; SPTR: beta-lactamase; PFAM: metallo-beta-lactamase superfamily

DNA sequence :
TTGGAATTATGTTTTGCCAAAATAAAGAAAAAACAAGTTAAGATGAATAGTACAACAAAATTGCTGAAAAATAAATCATT
TTGGTTATTGATAATGATTTTTCATATGCAATGCATATTTTCACAAGTTCCTTTTTTCGAGCGAGTATACGATGAAACTC
TTTCACAAGCCAGCTATGTGATAGCTGATCCCGATACAAAAGAAGCAATTGTCATAGATCCCAAAAGAGATGTTGATACG
TACTTGACGATCGCCCAAAAAAACAACCTGAAAATTACCAAAATTACCGAAACGCATATTCATGCCGATTTTCTTAGCGG
ATCGCGAGAGTTGCAAGCAGCTACAAAAGCAAAATTATTGCTCTCGAACGAAGGTGGAAAAGATTGGCAATACGAATTTG
CTCATGAACCTCTGAAAGATGGTGATGTGATAAAAGTAGGGCGATATACGCTAGAGGTGATGCATACGCCAGGACATACG
CCCGAAAGTTTAACTTTCCTTTTGAAAGGTGGAAAGCTGCAACCCATTCGTGCCATAACTGGTGATTTTATTTTTGTAGG
GGATGTTGGTCGACCAGATTTGTTAGAGAAAGCGGCTGGACAACAAGGTAGGCAAGAAGAAGCAGCCAAACAATTGTTTG
CCTCAATCAAGCGTTTCTCTCAACTGCCCGATAATACAGAAATTTGGCCAGGACATGGTGCAGGTTCCTTTTGTGGAAAA
AGTTTGAGTAACATTCCGCAATCGACTTTGGCCGAAGAAAAACAAACAAATGAAGCCTTGAAGATAAAAGAAGAAGCATC
TTTTGTTCGGTATATTTTAGAAGGTCAACCAGAACCCCCCAGCGTATTTTGCAGTGATGAAACAGCTAAATAA

Protein sequence :
MELCFAKIKKKQVKMNSTTKLLKNKSFWLLIMIFHMQCIFSQVPFFERVYDETLSQASYVIADPDTKEAIVIDPKRDVDT
YLTIAQKNNLKITKITETHIHADFLSGSRELQAATKAKLLLSNEGGKDWQYEFAHEPLKDGDVIKVGRYTLEVMHTPGHT
PESLTFLLKGGKLQPIRAITGDFIFVGDVGRPDLLEKAAGQQGRQEEAAKQLFASIKRFSQLPDNTEIWPGHGAGSFCGK
SLSNIPQSTLAEEKQTNEALKIKEEASFVRYILEGQPEPPSVFCSDETAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAPIG0061 YP_005732871.1 metallo-beta-lactamase family protein Not tested Type-V SCCmec Protein 3e-42 50
SAV0046 NP_370570.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-44 48
SA0043 NP_373283.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-44 48
unnamed BAC57482.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-44 48
unnamed BAB47616.1 hypothetical protein Not tested Type-III SCCmec Protein 7e-39 48