Gene Information

Name : Weevi_1306 (Weevi_1306)
Accession : YP_004238588.1
Strain : Weeksella virosa DSM 16922
Genome accession: NC_015144
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1385049 - 1387658 bp
Length : 2610 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR013093:IPR 019489:IPR017730; KEGG: fjo:Fjoh_3422 ATPase; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART

DNA sequence :
ATGGATTTTAATCAATTTACTATAAAAGCTAGGGAGGCAATACAAAGCGCCCAACAATTGGCTGCTCAAAATAAAAATCA
AGCCATTGAACCTGCACATTTATTAGCAGGGATGCTTGATGTAGACGAGAATGTTATTACTTATATTCTCGAGAAACAAA
GTGCCAACGTAACTCGAATCACCGAATTACTCTACGAAGAAATAAAAAAATTTCCTCGTGTAGAAGGTGTACAGGGAATG
CATTTATCTAATCAGAGTAATCAGATTTTGATTAACGCACAAAGTATTGCTAAAGAAATGAACGATGATTATATCTCGGT
AGAACATTTACTTTTTGCTCTATTAGAAAACATTTCGACAACGAGTCAATTATTAAAAGATCAAGGAATTACATTAGATA
ACAGTAAAAAAATTGCAATAGAATTGAGAAAAGGAGAAAGAATCACATCAGAAAACGCAGAAGGAACGTACAACGCACTG
AATAAGTACGCAAAAAACTTAACCGAATTAGCCAAAGAAGGAAAAATGGATCCTGTGATTGGTCGTGATGAAGAAATACG
CCGAGTGTTGCAGATTTTGTCTCGTAGAACCAAAAACAACCCTATTCTTATTGGTGAACCAGGTGTTGGTAAAACTGCAA
TTGCTGAGGGAATTGCTCACAGAATTGTCGATGGCGATGTACCCGAAAACTTGCTCAACAAACATATTTTCTCGTTAGAT
ATGGGAGCTTTAGTTGCCGGTGCAAAATACAAAGGTGAATTCGAAGAACGACTTAAGTCGGTTGTAAAAGAAGTATCCTC
TTCTGATGGAGAAATCATTCTTTTTATTGATGAGATTCACACATTGGTTGGTGCCGGTGGTGGTGAAGGTGCAATGGATG
CTGCTAACATCCTGAAACCTGCTCTTGCCCGTGGAGAGTTAAGAGCTATTGGTGCGACAACCCTCAACGAATACCAAAAA
TATTTCGAGAAAGATAAAGCACTCGAAAGACGCTTCCAGAAAGTTTTGGTAGATGAACCCGATGAAGAGTCTGCAATTTC
TATCCTACGAGGCATTAAAGAAAAATATGAACAACATCACAAAATTGCCATCAAAGACGAAGCGATTATTGCGGCAGTAA
AACTATCTACTCGTTATATTACTGATCGTTTCTTACCCGATAAAGCGATTGATTTGATGGATGAAGCAGCTTCTAAACTT
CGAATGGAAATGAATTCTAAACCAGAAGAACTGGATAAATTAGACCGAAAAATCATCCAACTAGAAATTGAGATTGAAGC
TATAAAAAAAGAAAATGACGAACGAAAACTCAACTTGCTAAAAGAAGAATTGAGCAATTTGCAAGACGAAAGAGCTCAAT
TAAACGCTAAATGGCAAGACGAAAAAGATAAAGCAGACGCTGCACAAAATATTCGTAAAGAGATTGATGACTTGAAAATC
CAAATGGAACGTGCAAAACGCGAATATGATTATGCCAAAGCATCTAAAATCCAATTCGAAGATCTAAAAAATGCAGAAGT
TCGTTTGGCTCAAGCCGAAGAAAACTTATCGAAAGATAAAAGCAATAAACTGGTAAAAGAATATGTAGATGCAGATGATA
TTGCAGAAGTAGTTTCGAAATGGACTGGTGTTCCTGCACAAAAAATGATGCAAAGTGAACGAGAAAAATTACTACATCTA
GAAGCTGATTTGCACAAACGTGTAATAGGACAAGATGAAGCAATAGAAGCAGTAGCCGACGCAATTCGTCGATCTAGAGC
AGGATTAAGCGACGAAGGTAAACCAATCGGATCTTTCTTATTCTTAGGATCAACAGGAGTTGGAAAAACCGAATTAGCCA
AAGCTTTGGCAGAATATCTGTTCGATGACGAAAATGCCATGACCCGAATTGATATGTCAGAGTACCAAGAAAGACATTCG
GTTTCTCGTTTGGTAGGTGCACCTCCAGGATATGTTGGGTATGATGAAGGAGGACAATTGACCGAGGCCGTACGTAGACG
TCCGTACTCTGTTATCTTGTTGGATGAAATGGAAAAAGCACATCCCGATGTGTTTAATATCTTACTTCAAGTCTTGGATG
ATGGACGATTAACCGATAATAAAGGTCGTTATATCAACTTCAAAAACACAATTATCATCATGACATCGAATTTTGGTGCG
CATACGATTCTCGAGCGTTTCGAAAATATTACAGACGAAAATGCTTCGACTGTTTATCAAGAAACTAAAGAGGTAGTTTT
TGAAGAGTTGAAACAAGGTTTCCGACCAGAATTCTTGAATCGTATAGATGAAATCATCCTATTCAAACCACTAAGCGAAA
ATCAAATCAGTGGAATTGTTGGCTTATACATGGACAGCGTAGCTAGAAAGCTCGCTCAGCGAGATATAACCATAGACATT
ACACCAGAAGCAACTGCGTATTTAGCGCAAAAAGGATATAATCCTCAGTTTGGTGCACGTCCTCTAAAAAGAGTTATCCA
ACAAGATGTTCTCAACGAATTATCGAAAGAAATCTTAAAAGGAGAAATAAAAGATAATGATGCGGTATTGATTGATTACT
TCGAAGAAAAACAGGGAGATAATAAGCTGGTTTTTAGAACCAATAAATAA

Protein sequence :
MDFNQFTIKAREAIQSAQQLAAQNKNQAIEPAHLLAGMLDVDENVITYILEKQSANVTRITELLYEEIKKFPRVEGVQGM
HLSNQSNQILINAQSIAKEMNDDYISVEHLLFALLENISTTSQLLKDQGITLDNSKKIAIELRKGERITSENAEGTYNAL
NKYAKNLTELAKEGKMDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGIAHRIVDGDVPENLLNKHIFSLD
MGALVAGAKYKGEFEERLKSVVKEVSSSDGEIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQK
YFEKDKALERRFQKVLVDEPDEESAISILRGIKEKYEQHHKIAIKDEAIIAAVKLSTRYITDRFLPDKAIDLMDEAASKL
RMEMNSKPEELDKLDRKIIQLEIEIEAIKKENDERKLNLLKEELSNLQDERAQLNAKWQDEKDKADAAQNIRKEIDDLKI
QMERAKREYDYAKASKIQFEDLKNAEVRLAQAEENLSKDKSNKLVKEYVDADDIAEVVSKWTGVPAQKMMQSEREKLLHL
EADLHKRVIGQDEAIEAVADAIRRSRAGLSDEGKPIGSFLFLGSTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHS
VSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEMEKAHPDVFNILLQVLDDGRLTDNKGRYINFKNTIIIMTSNFGA
HTILERFENITDENASTVYQETKEVVFEELKQGFRPEFLNRIDEIILFKPLSENQISGIVGLYMDSVARKLAQRDITIDI
TPEATAYLAQKGYNPQFGARPLKRVIQQDVLNELSKEILKGEIKDNDAVLIDYFEEKQGDNKLVFRTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-99 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Weevi_1306 YP_004238588.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-116 43