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Name : Weevi_1083 (Weevi_1083) Accession : YP_004238370.1 Strain : Weeksella virosa DSM 16922 Genome accession: NC_015144 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 1141963 - 1143882 bp Length : 1920 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: fbc:FB2170_10036 capsular polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein CapD-like; SPTR: nucleoside-diphosphate sugar epimerase; PFAM: polysac DNA sequence : ATGAGGATAATAAAACAACGTTTAAAAAAAGAAACTCCTAGGAGTTTAGTTTTACTTATAGACCTGACAATCGTTGCATT GTCTTATATGGTAACTAATTTTATATTCAATAGTTTCCAAGATCAATTCGATCTTGAGAGAATGATTGATAGGCTTCCTT TGATTTTACTTGTATACCTGATAGCATTTTTCATCTTCAAACCATATAGAGGAATCATTCGTCAAACCTCTTTAAAGGAT GCTACAAGTGTATTATGGTCGTGTTTAGTTGCAGGTTCAATTTTATTAGCAGTAGGTTTCATAGTACGCTATTTTGTAGA TAGCCCAACGATCAAGCAATTTGCGCGTTTTTCTTTTTCTGTAATCGTTTTCCACTCATTTATCTCTACGTTATTGATGG TTTATTGCCGTGCGATGTACAAAACATTTTACCGTTGGTACGTTCTAGAAACCCCGAACAAAGTACGCTCAATTATCTAC GGTGCTGGGGATTCTGGGATTATAACACTCAATGCTCTACAAAACGATACTTATAGAAAAAGCCTAATATTCGCTTTTGT TGACGATAACAAAAAAAAACAAAAAACGACTATTCATGGTATCAATGTTCTAAGTCCCGATGTGCTTACCGAATCTTTCA TTGTGCAACATCGGATAGATGAAATTATTCTCTCGATCCAAAACATAACTAACGAACAGATTTTCGAAATCACTCGTAAA CTAGACAAGTTACCTGTCAAACTAAAAATTATTCCACCTGCCAGCAACTGGTTAGACGGGAAATACACATCAAAGCAAAT TAAAAAGCTAAAGATCGAAGATTTACTTGGAAGAAAACCAATTAATCTAGACAATCCTATAATCGATGAAGAAATTGTAG GCAAGGTAGTTGTTGTAACCGGTGCTGCAGGTTCTATAGGCGGCGAGTTGGCGCGTCAGATTGCACAGAAAGCCTTCAAA CAACTAATATTAATCGATGTAGCCGAATCTGCTTTGTATGACATTCAGCAAGGATTCAAGACGACGAATAGCGAAGAAAC CCATTTTATTATAGGCAATATAAGAGACTATAAGAGAATGGAGCAAATTTTTATCCGTTTCAGACCCGATATTGTCTTTC ATGCGGCTGCCTACAAACATGTTCCTTTAATGGAGCAATACCCATTTGAGTCGGTCAACACGAATGTACGAGGCACCAAA AATGTTGCAGATCTAAGTGTTCTTTATGGAGTAAAAAAATTTGTAATGATTTCTACCGACAAAGCTGTGAACCCGACCAA TGTAATGGGTGCAACCAAACGTATCGCCGAAATTTACGTAAGTTGCCTCAACAAAAAATCTGCGACTAATTTTATCGTTA CTCGATTTGGGAATGTTCTTGGTTCTAATGGTTCTGTTATACCTTTATTCAAAAGACAAATCGAAAAAGGAGGTCCTCTT ACCGTAACACATGAAGGTATTACTCGTTTTTTCATGACGATTCCAGAAGCATGTCAGCTCGTTTTAGAAGCCGCAGTAAT GGGAAACGGTGGCGAAATATATGTTTTTGATATGGGCAAATCGGTAAAAATTATGGATCTTGCCAAAAGAATGATTTATT TGAGTGGGCTAAAATACCCAGACGATATAGATATCCGTATAACGGGACTGCGCCCTGGAGAAAAAATATATGAAGAACTT TTAGCCGATAAAGAAAATACTATTAAAACGCATCACGATAAAATAATGATTGCTAAAGTAAGGGATTGTGATTGTGATGA AATGGAATTCAAAATCAATAAATTAATTACCTTTGCTCAAAATCATTTTACACGAAAAGACAACCTAGAGTTAGTAAAAT TAATAAAAAGTATAGTGCCTGAGTATATATCACAAAACTCTGCTTACGAAGCCTTAGATAAACAGCCATATGAAAAATAA Protein sequence : MRIIKQRLKKETPRSLVLLIDLTIVALSYMVTNFIFNSFQDQFDLERMIDRLPLILLVYLIAFFIFKPYRGIIRQTSLKD ATSVLWSCLVAGSILLAVGFIVRYFVDSPTIKQFARFSFSVIVFHSFISTLLMVYCRAMYKTFYRWYVLETPNKVRSIIY GAGDSGIITLNALQNDTYRKSLIFAFVDDNKKKQKTTIHGINVLSPDVLTESFIVQHRIDEIILSIQNITNEQIFEITRK LDKLPVKLKIIPPASNWLDGKYTSKQIKKLKIEDLLGRKPINLDNPIIDEEIVGKVVVVTGAAGSIGGELARQIAQKAFK QLILIDVAESALYDIQQGFKTTNSEETHFIIGNIRDYKRMEQIFIRFRPDIVFHAAAYKHVPLMEQYPFESVNTNVRGTK NVADLSVLYGVKKFVMISTDKAVNPTNVMGATKRIAEIYVSCLNKKSATNFIVTRFGNVLGSNGSVIPLFKRQIEKGGPL TVTHEGITRFFMTIPEACQLVLEAAVMGNGGEIYVFDMGKSVKIMDLAKRMIYLSGLKYPDDIDIRITGLRPGEKIYEEL LADKENTIKTHHDKIMIAKVRDCDCDEMEFKINKLITFAQNHFTRKDNLELVKLIKSIVPEYISQNSAYEALDKQPYEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-72 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-69 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Weevi_1083 | YP_004238370.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-68 | 43 |
