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Name : Acav_0521 (Acav_0521) Accession : YP_004233011.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 568943 - 569851 bp Length : 909 bp Strand : + Note : KEGG: xop:PXO_03394 type III secretion apparatus protein SpaR/YscT/HrcT; TIGRFAM: Type III secretion protein SpaR/YscT; PFAM: Type III secretion system inner membrane R protein DNA sequence : ATGGAAGAGTATTTGCAGAATGGGTATGCGCTGGTCCGGCTGGGCGGAGACCTGCACGGCATGCTGGGATTGCTCGCGCT CTGCTGCGCACGCTTCTATGCGGCCATGCTGGTGCTGCCGGCGACCAACGACCAGTTGCTGCTGGGGCGCGTGCGCAACG GGACGGTGCTGCTGCTGGGGGCTTTCGTGGCGTGGGGGCAGCCTTCGGGGCTGCTCGAGTCCACCAGCCCGCTGGTCTTC ATCGCCCTGGTGGTGAAGGAGGCGCTGATCGGCATGCTGATCGGATTCGCCGTCTCGGTGGTGTTCTGGGCGGCCGAAGG CATCGGCATGCTGATTGACAACCAGGCGGGCTACAACAACATCCAGCAGACCAACCCGCTCAGCGGGCAGCAGAGCACGC CGGTGGGCAACCTGCTCATGCAGCTGGCGATCGTGGGCTTCTACATGCTGGGCGGCATGATGGTGTTCGTGGGGCTGCTG TTCGACAGCTACGACTGGTGGCCGCTGACGGGAATGATGCCCAGCTGGCCGGTGCTGGCGGAACGCTTCTTTCCCGACGA GGTCGCCGGCTACGCGCAGACCGTGCTCAAGATCGCGGGGCCGGTGCTCATGACGCTGATGCTGATCGACCTGGGCATGG GGTTGCTCAGCAAGGCGGCCGAGAAGCTCGAGCCCGGAAGCCTGGCGCAGCCCATCAAGGGCGCGGCCACCATGCTCCTG CTGGTGCTGCTGGTGGGGGTCTTCTTCCACCAGGTGCGCGAGCAGCTCACCCTGCGGCCCGTGGCGCAGCGGCTGGAGCG CATCTTCGCCCCGCGTGACCCGGCGGATTCCGGTCCCGCAGGCGTGGCTTCGCCACCGGTGCCTGCGCCGGCGACCGGCC CTGCTGCGAGCACCGCTGCAGGTCGCTAG Protein sequence : MEEYLQNGYALVRLGGDLHGMLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVF IALVVKEALIGMLIGFAVSVVFWAAEGIGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLMQLAIVGFYMLGGMMVFVGLL FDSYDWWPLTGMMPSWPVLAERFFPDEVAGYAQTVLKIAGPVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLL LVLLVGVFFHQVREQLTLRPVAQRLERIFAPRDPADSGPAGVASPPVPAPATGPAASTAAGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB8 | AAB08463.1 | HrpB8 | Virulence | Hrp PAI | Protein | 5e-47 | 49 |
| hrpB8 | BAB07850.1 | HrpB8 | Virulence | Hrp PAI | Protein | 4e-47 | 49 |
| hrpB8 | AAF61279.1 | HrpB8 | Virulence | Hrp PAI | Protein | 4e-47 | 49 |
| hrcT | AAP34337.1 | HrcT | Virulence | Hrp PAI | Protein | 1e-47 | 49 |
| hrcT | YP_362165.1 | HrcT protein | Virulence | Hrp PAI | Protein | 6e-47 | 49 |
| hrpB8 | YP_198732.1 | protein HrpB8 | Virulence | Hrp PAI | Protein | 6e-47 | 49 |
| hrcT | NP_640769.1 | HrcT protein | Virulence | Hrp PAI | Protein | 2e-47 | 49 |
| XC_3004 | YP_244072.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 5e-48 | 47 |
| hrcT | NP_636612.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 5e-48 | 47 |
