|
Name : Acav_0519 (Acav_0519) Accession : YP_004233009.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : type III secretion protein, YscU/HrpY family Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 567097 - 568155 bp Length : 1059 bp Strand : - Note : KEGG: xca:xccb100_3075 type III secretion system protein HrcU; TIGRFAM: Type III secretion protein HrpY/HrcU; PFAM: Type III secretion exporter DNA sequence : ATGTCGGAAAAAACCGAAGAGCCCACAGCCAAGAAACTCAAGGACGCCCGCAAGAAGGGCCAGACCACCAAGAGCCAGGA CCTGGTGGCCGGTGCCGTCCTGGGTGCGGCCCTGCTCGTCCTCACGGGTGCGGGCCCCCTGCTCTACGACCGCGTGCGCC GCATCGTCACCACGGCGCTGGAACAGGGCGTGCGCGTGCACGGCACGCAGGAGCTGCTGGCGCTGCTGTCCTCCATGGCG CTCGACGGCATGGCGGTGGCTTTCGGCATGGTCATCGTCTCGGTCCTGGTGGCCGTGCTGGCCCTGCTGCCGCAGGTCGG CTTCATGATCACCTTCGAGCCCCTCACGCCCAAGTTCGACAGCCTGAACCCCGCCGAGGGGCTCAAGAAGATGTTCAACG CGCGGTCGCTCGTCGAATTCGCCAAGTCCGTCCTCAAGGCCGTCGTCTTCGGCGCCGTGCTGTGGCACATCGTGACCGGG CTGGTGCCCCTGCTCGTGGGTTCCGTCTATCTCACGCCCGAGGCCAGCGGAAAGATCGCCTGGAGCGCGCTGCTGAAACT CTTTTCGTTCGCATTCCTCGTCTTCCTGGTCATCGGCCCCCTCGACTTCGGCCTGCAGCACTGGCTCTTCATCCGGGACC AGCGCATGAGCAAGGACGACGTGAAGCGCGAGAACAAGGACAGCGAAGGCGACCCGCACCTCAAGGGCCACCTCAAGTCG CTGCGCGAGGAAATGGCGACATCACCGCCGCAGGAACGGGTGCCGGGCGCCACGGTGGTCGTCACCAACCCCACCCATTA CGCCGTGGCGCTGCGCTACGAAGCCGGCGCGACCCCGCTGCCCATCGTCGTGGCCAAGGGCATGGACGAACAGGCCGCCG TCATCCGCGGACTGGCCGCGTTGCACCACATCCCGCTCATCGCCAACCCGCCGCTGGCGCGGGCCCTGCACAAGCTGCCG CTGGACCAGCCCATTCCCGAGGAACTGTTCGAGGCCGTCTCCGTCGTGCTGCGCTGGGTGGCGGAACTCGACCGGCTCGG CGGCGGCAGCCCGCGCTGA Protein sequence : MSEKTEEPTAKKLKDARKKGQTTKSQDLVAGAVLGAALLVLTGAGPLLYDRVRRIVTTALEQGVRVHGTQELLALLSSMA LDGMAVAFGMVIVSVLVAVLALLPQVGFMITFEPLTPKFDSLNPAEGLKKMFNARSLVEFAKSVLKAVVFGAVLWHIVTG LVPLLVGSVYLTPEASGKIAWSALLKLFSFAFLVFLVIGPLDFGLQHWLFIRDQRMSKDDVKRENKDSEGDPHLKGHLKS LREEMATSPPQERVPGATVVVTNPTHYAVALRYEAGATPLPIVVAKGMDEQAAVIRGLAALHHIPLIANPPLARALHKLP LDQPIPEELFEAVSVVLRWVAELDRLGGGSPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-60 | 46 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-60 | 46 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 2e-58 | 46 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-60 | 45 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 7e-58 | 45 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 5e-58 | 45 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 6e-58 | 45 |
