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Name : Acav_0518 (Acav_0518) Accession : YP_004233008.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 564989 - 567052 bp Length : 2064 bp Strand : - Note : KEGG: bcm:Bcenmc03_5931 HrcV family type III secretion protein; TIGRFAM: Type III secretion protein HrcV; PFAM: Type III secretion system FHIPEP DNA sequence : ATGGCCAAACGATTCGACTCCACCCTGGTCAACGACCTGACGATGGCCGGCTTTCTCGTCGGCGTGATCGCGCTGATGAT CCTGCCGCTGCCCACGCTGCTGATCGACTCGCTGCTCGCGATCAACCTCAGCATCAGCGTGCTGCTGCTGATGACCACCC TGTTCATACCGGACGCGGTCTCGCTCTCCACCTTCCCTTCGCTGCTGCTGTTCACCACGCTGTTCCGGCTGTCGCTGAAC ATCGCCTCGACCAAGGCCATCCTGCTGCACGCCGACGCGGGCCACCTGATCGAAAGCTTCGGCCAGCTCGTGGTGGGCGG CAACCTCGTGGTGGGCATCGTGGTGTTCCTGGTGATCACCATCGTGCAGTTCATCGTCATCGCCAAGGGCTCGGAGCGCG TCGCCGAAGTCGGCGCGCGCTTCACGCTCGACGCGCTGCCCGGCAAGCAGATGAGCATCGACGCCGACCTGCGCGCCGGC CTGCTCACCGCCGACGAGGCCAAGGCCAAGCGCGCCCGGCTCAGCATGGAGAGCATGCTGCACGGCGGGATGGACGGCGC GATGAAGTTCGTGAAGGGCGACGCCATCGCGGGCCTCATCATCACGCTGGTCAACATCCTCGCGGGCATCGTGGTGGGCA TCATGTACCACAGCATGACCGCCGGGGAGGCGGCCAACCGCTTCGCCGTGCTGTCCATCGGCGACGCCATGGTCTCGCAG ATTCCCGCGCTCTTCATCTGTATGGCCGCCGGTATCCTGACCACCCGCGTGGCCGACGAGCACCGCAAGAAGCCCACCTC CCTGGGCGAGGACATGACGGAGCAGCTCACGCGCAATACCCGCTCCATGTACCTCGCGGGCGCGCTCACCCTGGGCTTCG CGGCCATTCCGGGCTTTCCCGCCGTTCCGTTCTGCCTGCTGGCGGCGGGCCTGGTGGGCGGCGGCCAGTGGCTGTCGCGC AGCCGCAAGTCGGCCACGCCGGGCAGCGCCAAGACCCACTCCAAGCCCATCGCCTCCCTGCTGCGCGAAGGCGGCAAGGG CGAGGGCACGGCCATCCAGCACCGCGCCCCCGAATTCGCCAAGCCGCTGTCGATCCGCCTGTCCGACCCGCTCGCCCGCC TGCTCAATGCCGAGCGGCTCGACCAGGCCCTGAACAAGGAGCGTGAAGGGCTGCAGACGCGGCTGGGGCTGCCCTTCCCC GGCGCCGCGATGTGGGTCTGGGACGGCCTCCAGGACCTGCGCTTCGACATCCTCATCAACGACGTGCCCGTGGCACAGCC GCAATTGCCCGGCGACATGCTCCTGCTGCTGGACCCGCAGTCCGCCCTGGCCGCGCAGGCCCAGCGGCACGGCCCGCTGC TGGGCATGGAGGAGTCGCTCTGGGTCCCCCAGGCGGCCATCCCGCCCGCCCAGCGCGCCGGGGCCTGCCTGGAGATCGAG CAGGTGATCGCCCGCGAAGTGGTGGAGATGCTCCAGCGCCACGCCCACCTGTTCATGGGCGTGCAGGAAGTGCAGTGGAT CATCGAGCGGGCCACGCCGGAATATCCGGGGCTGGTGGCCGAAGTGCAGAAGGTCATGCCGCTGCAGCGCATGGCCGAGG TGCTGCGGCGCCTGCTGGAAGAACAGGTGCCCATCCGCAACATCCGCAGCATCTTCGAAAGCCTCATCACCTGGGCGCCC AAGGAAAAGGACCTGCTGCTGCTCACCGAATACGTGCGCTCCGACCTGGGCCGCTACCTCGCGCACGAGGCCGGCGGCGG CCAGCGGCACATCTCGGCCATCCTGCTCGCGCCGGAAATCGAACAGGCGATCCGCGGCTGCATCAAGCCCACGCCCGCCG GCAACTACCTCGCCATGTCGCCCGACGACGCGCGGGACATCACCGACCGCATCGCGGCCGTCGCGCGCTCGTCGCCCGCC ACGGGCGTGGCCCTGGTCACGTCGATGGACATCCGCCGCTACGTCAAGAAGATGATCGAAGGCCGCATCGACTGGCTGCG CGTGTATTCCTTCCAGGAACTGGGCAGCCTGATCGAGCTGCGGCCGATCGGCCGCGTCGCCTAG Protein sequence : MAKRFDSTLVNDLTMAGFLVGVIALMILPLPTLLIDSLLAINLSISVLLLMTTLFIPDAVSLSTFPSLLLFTTLFRLSLN IASTKAILLHADAGHLIESFGQLVVGGNLVVGIVVFLVITIVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAG LLTADEAKAKRARLSMESMLHGGMDGAMKFVKGDAIAGLIITLVNILAGIVVGIMYHSMTAGEAANRFAVLSIGDAMVSQ IPALFICMAAGILTTRVADEHRKKPTSLGEDMTEQLTRNTRSMYLAGALTLGFAAIPGFPAVPFCLLAAGLVGGGQWLSR SRKSATPGSAKTHSKPIASLLREGGKGEGTAIQHRAPEFAKPLSIRLSDPLARLLNAERLDQALNKEREGLQTRLGLPFP GAAMWVWDGLQDLRFDILINDVPVAQPQLPGDMLLLLDPQSALAAQAQRHGPLLGMEESLWVPQAAIPPAQRAGACLEIE QVIAREVVEMLQRHAHLFMGVQEVQWIIERATPEYPGLVAEVQKVMPLQRMAEVLRRLLEEQVPIRNIRSIFESLITWAP KEKDLLLLTEYVRSDLGRYLAHEAGGGQRHISAILLAPEIEQAIRGCIKPTPAGNYLAMSPDDARDITDRIAAVARSSPA TGVALVTSMDIRRYVKKMIEGRIDWLRVYSFQELGSLIELRPIGRVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 2e-145 | 57 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-145 | 57 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-147 | 57 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 2e-147 | 57 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 3e-107 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acav_0518 | YP_004233008.1 | HrcV family type III secretion protein | VFG0064 | Protein | 1e-106 | 43 |
| Acav_0518 | YP_004233008.1 | HrcV family type III secretion protein | VFG0384 | Protein | 5e-101 | 42 |
| Acav_0518 | YP_004233008.1 | HrcV family type III secretion protein | VFG0198 | Protein | 7e-100 | 42 |
| Acav_0518 | YP_004233008.1 | HrcV family type III secretion protein | VFG2126 | Protein | 6e-96 | 41 |
