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Name : Acav_0515 (Acav_0515) Accession : YP_004233005.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : Yop virulence translocation R Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4790 EC number : - Position : 562301 - 562963 bp Length : 663 bp Strand : - Note : KEGG: rso:RSp0860 type III secretion system protein; TIGRFAM: Yop virulence translocation protein R; PFAM: Type III secretion system inner membrane P protein DNA sequence : ATGACGCCGATTTCGGGACTCGATCCCATCTCGCTGGCGCTGGCGCTGATGCTGCTGGCGGTGCTGCCGTTCGCCGCCAT GATCGTCACGTCCTACACCAAGGTGGTGGTGGTCCTGGGCCTGCTGCGCAACGCGCTCGGCGTGCAGCAGGTGCCTCCCA ACATGGTGCTCAACGGCATCGCCATCATCATCTCGGTGTACGTCATGGCCCCGGTCGCCATGGAGGCCTCGGACCGCATG CAGATGCTGCCGCCCTCCGCGCAGAGCTCCAACACCCAGCAGATGCTCGCCGCCGCCTCGGCCGCACGCGAGCCGTTCCG CAAGTTCCTGGACAAGCACGCCGATGCTGCCGAGAAGGCGTTCTTCCTCAAGTCGGCCCAGGCGCTCTGGCCCGAGGACC GTGCCCGGTCGCTGCAGGCCGACGACCTCGTGGTGCTGGCGCCCGCTTTCCTGCTCACCGAGCTTACCGCCGCCTTCCGC ATCGGCTTCCTGCTCTACCTGGCCTTCATCATCGTCGAGCTGGTCATCGCCAACGTCCTGCTGGCCATGGGCCTGTCCCA GGTCTCCCCCACCAACGTCGCCATCCCCTTCAAGCTGCTGCTCTTCGTCGTGCTCGACGGATGGTCCCAGGTGATGCACG GGCTGGTCATGACCTATCGCTGA Protein sequence : MTPISGLDPISLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRM QMLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEDRARSLQADDLVVLAPAFLLTELTAAFR IGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-62 | 68 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-62 | 68 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-61 | 66 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-61 | 66 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-61 | 66 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-61 | 66 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-61 | 65 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-61 | 65 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-47 | 48 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 4e-40 | 43 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-39 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-39 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-39 | 41 |
| hrcR | NP_791222.3 | type III secretion protein HrcR | Virulence | Hrp PAI | Protein | 2e-33 | 41 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-33 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 9e-38 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-38 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 4e-38 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 6e-38 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 9e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acav_0515 | YP_004233005.1 | Yop virulence translocation R | VFG0394 | Protein | 1e-46 | 51 |
| Acav_0515 | YP_004233005.1 | Yop virulence translocation R | VFG0044 | Protein | 3e-50 | 49 |
| Acav_0515 | YP_004233005.1 | Yop virulence translocation R | VFG0188 | Protein | 7e-47 | 49 |
| Acav_0515 | YP_004233005.1 | Yop virulence translocation R | VFG0519 | Protein | 2e-38 | 41 |
