Gene Information

Name : Acav_0514 (Acav_0514)
Accession : YP_004233004.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : type III secretion protein, HrpO family
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 562017 - 562280 bp
Length : 264 bp
Strand : -
Note : KEGG: rsl:RPSI07_mp0805 type III secretion protein HrcS; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3

DNA sequence : 
ATGAACCACGACAACATCGTCCAGCTCACCTCCGAGGCCCTCATGCTGTGCCTGCTGCTGTCGCTGCCGGCCGTGGCCGT
CGCGGCGATCGTCGGCCTGCTCGTGGCGCTGGTGCAGGCCGTCACCTCGCTGCAGGACCAGTCGATCTCGCAAGGCATCA
AGCTCATCTGCGTGACGGTCACCGTCGCCGTGAGCGCCCCCTGGGTGGGCAGCACCGTGCTGCAGTTCTCGCAACGGCTT
CTCACGGCCGTCTTCACGCCATGA

Protein sequence : 
MNHDNIVQLTSEALMLCLLLSLPAVAVAAIVGLLVALVQAVTSLQDQSISQGIKLICVTVTVAVSAPWVGSTVLQFSQRL
LTAVFTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS YP_198719.1 hypothetical protein Virulence Hrp PAI Protein 0.006 57
hrcS YP_362152.1 HrcS protein Virulence Hrp PAI Protein 0.006 57
hrcS BAB07863.1 HrcS Virulence Hrp PAI Protein 0.004 57
hrcS AAD21322.1 HrcS Virulence Hrp PAI Protein 0.004 57
hrcS NP_640756.1 HrcS protein Virulence Hrp PAI Protein 0.006 56
hrcS AAP34350.1 HrcS Virulence Hrp PAI Protein 0.004 56