Gene Information

Name : Acav_4777 (Acav_4777)
Accession : YP_004237221.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 5467524 - 5468543 bp
Length : 1020 bp
Strand : -
Note : SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: vei:Veis_0154 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core

DNA sequence :
ATGCTTTCCGCCCCCCCCGCGCAGGGGCCGGCCCTGCCGCCCGCGCCTTTCTCCGCCGAACGGGCCGTGCGCCTGGCCCG
CGAAACCTTCGATACCGAAGCTGCCGCCCTCTCGGCGCTCGCCGCCCGCGTGGGCGGTGCCTTTGCGGACGTGGTGCACC
GCGTGCTGGCCACCTCCGGCCGCGTGGTGGTCATGGGCATGGGCAAGAGCGGCCACGTGGGCCGCAAGATCGCGGCGACG
CTGGCTTCCACCGGCACGCCGGCCTTCTTCGTGCATCCGGCCGAGGCCAGCCATGGCGACCTCGGCATGGTGACGCCCGG
CGACCTGGTGCTGGCCATCTCCAACAGCGGCGAGAGCGGCGAGCTGACCGTGCTGCTGCCGGTGCTCCGGCGCCTGGGCG
TGCCGCTGGTGGCGATGACGGGCGGACTGGAGTCCACCCTGGCCCGCCATGCCGACCTGGTGCTCGATTGCGGCGTGGAG
CGCGAAGCCTGCCCGCTCAACCTGGCGCCCACGACCAGCACCACGGCCCAGCTGGCCATGGGCGACGCCCTGGCGGTGGC
GCTGCTGGATGCCCGGGGCTTTCGCTCCGAGGATTTCGCGCGCTCCCATCCTGGCGGCGCTCTGGGCCGCAAGCTGCTCA
CGCACGTGAGCGACGTGATGCGCTCGGGCACCGACGTGCCGCGCGTGCTGCCGGAGGCCTCGTTCAGCGAACTGATGCGC
GAGATGAGCGCCAAGCGCCTCGGCGCGTCGGCCATCGCGGACGCGCAGGGCCGCATCCTGGGCATCTTCACCGATGGCGA
CCTGCGCCGCCGCATCGAGGCCGGCGCGGACCTGCGCAGCGTCACGGCCGGCGAGGTGATGCATGCCGCGCCGCGGACCA
TCGCCCCCGACGCGCTCGCGGCGGATGCGGCCGAGATGATGGAGCGCCATGCCATCACCAGCGTGCTCGTCGCCTCGGAA
GGCGGCGTGCTGGCGGGCGTGGTCCATATCGGCGACCTCATGCGGGCGAAGGTCATCTGA

Protein sequence :
MLSAPPAQGPALPPAPFSAERAVRLARETFDTEAAALSALAARVGGAFADVVHRVLATSGRVVVMGMGKSGHVGRKIAAT
LASTGTPAFFVHPAEASHGDLGMVTPGDLVLAISNSGESGELTVLLPVLRRLGVPLVAMTGGLESTLARHADLVLDCGVE
REACPLNLAPTTSTTAQLAMGDALAVALLDARGFRSEDFARSHPGGALGRKLLTHVSDVMRSGTDVPRVLPEASFSELMR
EMSAKRLGASAIADAQGRILGIFTDGDLRRRIEAGADLRSVTAGEVMHAAPRTIAPDALAADAAEMMERHAITSVLVASE
GGVLAGVVHIGDLMRAKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-53 49
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 7e-53 49
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-53 48