|
Name : Acav_4515 (Acav_4515) Accession : YP_004236965.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 5164583 - 5166670 bp Length : 2088 bp Strand : + Note : SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: dia:Dtpsy_3309 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal DNA sequence : ATGGCCAATTCTCAACAGATGGCGAATGCGATCCGCGCACTCGCAATGGATGCAGTTCAACAAGCCAATTCCGGCCATCC CGGCGCCCCGATGGGCATGGCCGACATGGCCGTCGCGCTGTGGTCCCGCCACCTGCGCCACAACCCCGCCAACCCGCAGT GGGCCGACCGCGACCGCTTCGTGCTCTCCAACGGCCACGGCTCCATGCTGCTGTACGCGCTGCTGCACCTCACGGGCTAC GACCTGCCGATCGAAGAGCTGAAGAACTTCCGCCAGCTGCACAGCAAGACGGCCGGCCACCCCGAATACGGCATCACCCC CGGCGTGGAGACGACCACCGGCCCGCTGGGCCAGGGCATCACCAACGCCGTGGGCTTCGCGCTGGCCGAGAAGCTGCTGG CCCGCGAGTTCAACCGCAGGAACGGCGACGTGGACCACACCATCGTGGACCACCACACCTACGTGTTCCTCGGCGACGGC TGCCTGATGGAGGGCATCAGCCAGGAGGCGATCTCGCTAGCCGGCGCCTGGAAGCTGGGCAAGCTGATTGCGCTCTACGA CGACAACGGCATCTCCATCGACGGCCAGGTCGCGCCCTGGTTCGTGGACGACACCCCCGGCCGTTTCCGCGCCAGCGGCT GGAACGTGATCGGCCCGGTCGATGGCCATGACGTGGAGGCCGTGGCCGCCGCCGTGCAGAGCGCCAAGACCAGCACCGAC AAGCCCACGCTGATCGTCTGCAAGACCGCCATCGGCAAGGGCTCGCCCAACCGCGCCGGCACCTCCAAGGCCCACGGCGA ACCGCTGGGCGCCGATGAGATCACCCTGACGCGCAACGCCATCGGCTGGAGCCACGTGCCCTTCGAGATCCCGGCCGAGG TGTACGCCGACTGGAACGCCAGGGACGCCGGCGCACAGGCCGAGTCCGACTGGCAGCAGCGCTTCGATGCCTACGCCGCC GCGTACCCCGAGCTGGCCGCCGAATTCCTGCGCCGCATGGCGGGCGACCTGCCCAGGCACTTCGCCCAGACCGCCGTGGA CACCGTGGTGAACGCCCACACCAAGGCCGAGACCGTGGCCAGCCGCAAGGCCAGCCAGCTCGCGCTGGAAGCCTTCACGG CAGCACTCCCCGAGCTGCTCGGCGGCAGCGCCGACCTGACGGGCTCCAACCTCACCAACACCAAGAGCACGCCCGCGCTG CGCTTCGACGAGAACGGCGACGTGGTGCAGGTGGAAGTCAACACCGGCGGCGCGGAGACCGCCAAGCTGGGCGGCCGCCA CATCAACTACGGCGTGCGCGAGTTCGGCATGGCCGCGATCATGAACGGCATCGCGCTGCACGGCGGCTTCATCCCGTACG GCGGCACCTTCCTCACGTTCAGCGACTACAGCCGCAACGCCATCCGCATGGCCGCGCTCATGAAGCTGCGCGTGGTGCAC GTGTTCACGCACGACTCCATCGGCCTGGGCGAGGACGGCCCCACCCACCAGTCGATCGAGCATGCCGCCAGCCTGCGCCT GATTCCGGGCCTGGACGTCTGGCGCCCCGCCGACACGGCCGAGACCGCGGTGGCCTGGAGCGTGGCCCTGTCCAACCGCA ACCGGCCCACCGCCCTGCTGCTGTCGCGCCAGAACCTCGCCTATGCCCCCAAGCGCGACCTGGGCGACATCTCGCGCGGT GCTTACGTGCTGAGTGAGCCGGCCGACGCAGGCATCAAGAAGAAGGCCCAGGCGGTGATCATCGCCACCGGCTCCGAAGT GCAGTTGGCCCTGGCCGCGCAGAAGCTGCTGGCCGAGAAGAAGATCGCCGCGCGCGTGGTCTCCATGCCCAGCACCACCA CCTTCGACCGCGAAGACACGAAGTACAAGGCCAGCGTGCTGCCGGCCGGCGTGCCGCGCATCGCCGTGGAAATGGGCGTG ACCGACGGCTGGTGGAAGTACGGCTGCGCCGCCGTGGTCGGCATCGACACCTTCGGCGAGTCGGCCCCGGCCCCGGTGCT GTTCAAGCATTTCGGCTTCACGCCGGAGAACGTGGCCGATTCCGTCATGGTGGCGATCGGCGCAGCGCGGCTGAAGAAGG CCCGCTGA Protein sequence : MANSQQMANAIRALAMDAVQQANSGHPGAPMGMADMAVALWSRHLRHNPANPQWADRDRFVLSNGHGSMLLYALLHLTGY DLPIEELKNFRQLHSKTAGHPEYGITPGVETTTGPLGQGITNAVGFALAEKLLAREFNRRNGDVDHTIVDHHTYVFLGDG CLMEGISQEAISLAGAWKLGKLIALYDDNGISIDGQVAPWFVDDTPGRFRASGWNVIGPVDGHDVEAVAAAVQSAKTSTD KPTLIVCKTAIGKGSPNRAGTSKAHGEPLGADEITLTRNAIGWSHVPFEIPAEVYADWNARDAGAQAESDWQQRFDAYAA AYPELAAEFLRRMAGDLPRHFAQTAVDTVVNAHTKAETVASRKASQLALEAFTAALPELLGGSADLTGSNLTNTKSTPAL RFDENGDVVQVEVNTGGAETAKLGGRHINYGVREFGMAAIMNGIALHGGFIPYGGTFLTFSDYSRNAIRMAALMKLRVVH VFTHDSIGLGEDGPTHQSIEHAASLRLIPGLDVWRPADTAETAVAWSVALSNRNRPTALLLSRQNLAYAPKRDLGDISRG AYVLSEPADAGIKKKAQAVIIATGSEVQLALAAQKLLAEKKIAARVVSMPSTTTFDREDTKYKASVLPAGVPRIAVEMGV TDGWWKYGCAAVVGIDTFGESAPAPVLFKHFGFTPENVADSVMVAIGAARLKKAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-179 | 58 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 57 |
