Gene Information

Name : Acav_0426 (Acav_0426)
Accession : YP_004232916.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.4
Position : 461037 - 463169 bp
Length : 2133 bp
Strand : +
Note : TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: vap:Vapar_4994 K+-transporting ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase

DNA sequence :
ATGACGACCCCCCAATCCCCTGCCGCGGCACCCGCCGTGGACCTGGCTCCCTCGCGGAACCTCACGCTGTTCGATGCCGC
GCTGGTGCGCCCCGCCGTGTGGCAGGCGTTCGCCAAGCTGGACCCGCGCGTTCAGTGGCGCAATCCGGTGATGTTCATCG
TTTTCATCGGCAGCATCTTCACGACGCTGCTGTGGTTGCAGGCGCTGACCACTGCCCAGGACATGGGCATGCGCCCGGCG
TTCATCCTTGCGGTGGCCGTGTGGCTGTGGTTCACCGTGCTGTTCGCCAACTTTGCCGAGGCGCTGGCGGAAGGCCGCAG
CAAGGCGCAGGCCGCATCGCTGCGCGGGCTGCGCAAGGACACCTGGGCCAAGAAGCTCTCCGAGCCGCGCCATGGCGCGC
GCTTCCTGCCCGAGCAGGCCACCAACCTGCGCAAGGGGGACGTGGTGCAGGTGGACGCCGGCGACGTGATCCCGCTCGAC
GGCGAGGTGATCGAGGGCATGGCCTCGGTGGACGAAAGCGCCATCACGGGCGAGTCGGCACCGGTGGTGCGTGAGTCCGG
CGGCGACTTCTCCGCGGTGACCGGCGGCACGCGCGTGCTGTCGGACTGGCTGGTGGTGCGCATCACGGTGAACCCGGGCG
AATCGTTCCTCGACCGCATGATCGGCATGGTGGAGGCCGCCAAGCGGCAGAAGACGCCCAACGAGGTGGCGCTCACCATC
TTGCTGGTGGCGCTCACCATCGTGTTCCTCGTGGTGACTGTGACGCTGCTGCCGTTCTCGCTCTTCAGCGTGCAGGCCTC
GGGCGCGGGCACCGTGGTGTCGCTCACCGCGCTGATCGCGTTGCTGGTGTGCCTGATCCCCACCACCATCGGCGGCCTGC
TGTCGGCCGTGGGCGTGGCGGGCATGAGCCGCATGATGCAGGCGAACGTGATCGCCACGTCGGGCCGCGCCGTGGAGGCC
GCGGGCGACGTGGACGTGCTGCTGCTGGACAAGACCGGCACGATCACGCACGGCAACCGGCAGGCGAGCGCGTTCATGCC
GGCGCCGGGCGTGTCCCGCGCGCACCTGGCCCGGGCCGCGCTCATGGCCTCGCTGGCCGACGAGACGCCCGAAGGCCGCA
GCATCGTTGAGCTGGCACGCCGCGAGGGCATCGAAGCGGAAGCCGGCGCGGCCGCCGGCCTGGTGCTGGTGCCCTTCACC
GCGCAGACCCGCATGAGCGGCGTGGACCTGCCCGCCACCAACGGCGCGGCCGCCGTTGCGCTGCGCAAGGGCGCCGTGCA
GGCGCTGACCCGGCACGTGGAGGCGCTGGGCGGCGCGATGCCGATGGAGGTGGCCCGCGCCGCGGACGATGTGGCCCGCC
GCGGCAGCACGCCGCTGGCCGTGGCGGAGGGCAGCCGCGTGCTGGGCGTGGTGGAGCTCAAGGACATCGTCAAGGCCGGC
ATCCAGGCGCGGTTCGCCGAGCTGCGGCGCATGGGCATCAAGACGGTGATGATCACGGGCGACAACCGGCTGACGGCCGC
GGCCATCGCGGCCGAGGCCGGGGTGGACGACTTCCTCGCCGAAGCCACGCCCGAGGACAAGCTCGCCCTCATCCGCCGCT
ACCAGTCCGAAGGCCGGCTCGTCGCCATGACCGGCGATGGCACGAACGACGCGCCCGCGCTGGCCCAGGCCGACGTGGCC
GTGGCCATGGGCAGCGGCACGCAGGCCGCCAAGGAGGCCGGCAACATGGTGGACCTGGATTCCAACCCCACCAAGCTGCT
GGAAGTGGTGGAGACGGGCAAGGCGCTGCTGATGACGCGCGGCTCGCTCACCACGTTCTCGATCGCCAACGACGTGGCCA
AGTACTTCGCCATCATCCCGGCGATGTTCGTCTCCACCTATCCGCAGCTCGGCGCGCTGAACGTGATGCGGCTGGCGAGC
CCGTCGTCGGCCATCCTGTCGGCGGTGATCTTCAACGCGCTGATCATCGTCTTCCTGATTCCGCTCGCGCTCAAGGGCGT
GCGCTACCGCCCCGTGGGCGCTGCCGCGCTGCTGCGGCGCAACCTCGCCGTGTACGGCCTGGGCGGGCTCGTCGTGCCGT
TCATCGGGATCAAGCTCATCGACTGGGTGCTCGTGGCCGTCGGCCTCGTCTGA

Protein sequence :
MTTPQSPAAAPAVDLAPSRNLTLFDAALVRPAVWQAFAKLDPRVQWRNPVMFIVFIGSIFTTLLWLQALTTAQDMGMRPA
FILAVAVWLWFTVLFANFAEALAEGRSKAQAASLRGLRKDTWAKKLSEPRHGARFLPEQATNLRKGDVVQVDAGDVIPLD
GEVIEGMASVDESAITGESAPVVRESGGDFSAVTGGTRVLSDWLVVRITVNPGESFLDRMIGMVEAAKRQKTPNEVALTI
LLVALTIVFLVVTVTLLPFSLFSVQASGAGTVVSLTALIALLVCLIPTTIGGLLSAVGVAGMSRMMQANVIATSGRAVEA
AGDVDVLLLDKTGTITHGNRQASAFMPAPGVSRAHLARAALMASLADETPEGRSIVELARREGIEAEAGAAAGLVLVPFT
AQTRMSGVDLPATNGAAAVALRKGAVQALTRHVEALGGAMPMEVARAADDVARRGSTPLAVAEGSRVLGVVELKDIVKAG
IQARFAELRRMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEDKLALIRRYQSEGRLVAMTGDGTNDAPALAQADVA
VAMGSGTQAAKEAGNMVDLDSNPTKLLEVVETGKALLMTRGSLTTFSIANDVAKYFAIIPAMFVSTYPQLGALNVMRLAS
PSSAILSAVIFNALIIVFLIPLALKGVRYRPVGAAALLRRNLAVYGLGGLVVPFIGIKLIDWVLVAVGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-160 61
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-160 61
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-139 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-139 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-140 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-139 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-139 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-139 54