Gene Information

Name : Acav_4008 (Acav_4008)
Accession : YP_004236465.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4581112 - 4581831 bp
Length : 720 bp
Strand : -
Note : KEGG: dac:Daci_1322 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduc

DNA sequence : 
ATGCGCCTGTTGCTCGTCGAGGACGACGTGATGCTGGCCAGCGGCATCAAGCTGGGCCTGACCGATGCGGGCTACGCGGT
GGACTGGGTGGGCAGCGGGGAGCGGGCGGAAGAGGTGCTGCGCGGCGAGTCTTTCGATGCCGCCATCATCGATATCGGGC
TGCCGGGCATGGACGGCCTGGAGCTGACGCGCCGCCTGCGCGAGCCGGAGATGGCCAGCCCGTCGATGCCGGTGCTCATC
CTCACGGCCCGCGATGCCCTGCACGACCGGGTCCAGGGCCTGGACCTCGGGGCGGACGATTACATGGTCAAGCCCTATGA
ACTGCCCGAACTGCTCGCACGCCTGCGCGCGCTGCTGCGCCGCTCGCATGCGGCCACCACCGCGGTGCTGAGCTTCGGGC
CGCTGGAGCTGGACACGGCAGGCCGGCACGCGAGCCTGCGCTTCCCGGCCGCCGATGGCGGATTGGCCGTGCGCCAGCCC
ATCGAGCTCGGACCACGGGAGTGGACGGTGCTGGAATACCTGCTGATCCACGCGCCCAAGCCGGCCAGCAAGGAAAAGCT
GGTCCAGGCGCTGACCGGCTGGGACAAGGAGATCACCCCCAATGCCGTGGAGGTGTATGTGTCCCGCCTGCGGAGCAAGC
TGGAGCCCGGCGGCGTGGCGCTGCGGTCCATCCGGGGCTTCGGCTACCGGCTGGAGTTGCTGGCGCGCGGGCAGGGTTGA

Protein sequence : 
MRLLLVEDDVMLASGIKLGLTDAGYAVDWVGSGERAEEVLRGESFDAAIIDIGLPGMDGLELTRRLREPEMASPSMPVLI
LTARDALHDRVQGLDLGADDYMVKPYELPELLARLRALLRRSHAATTAVLSFGPLELDTAGRHASLRFPAADGGLAVRQP
IELGPREWTVLEYLLIHAPKPASKEKLVQALTGWDKEITPNAVEVYVSRLRSKLEPGGVALRSIRGFGYRLELLARGQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acav_4008 YP_004236465.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 8e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acav_4008 YP_004236465.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-31 42