|
Name : Acav_3864 (Acav_3864) Accession : YP_004236322.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4408107 - 4408766 bp Length : 660 bp Strand : - Note : KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver d DNA sequence : ATGCGCCTTCTGCTGGTGGAAGACGACACGATGATCGGCGAAGCCGTGTACGACCTGCTGCGTGCGGAGCAGCACGCGGT GGACTGGGTGCGCGATGGCGAGATGGCCGATACGGCGCTGCGCACGCAGACCTACGACGTGGTGCTGCTGGACCTGGGCC TGCCGCGCCGCGACGGCCTGGAGGTGCTGCGCGATCTGCGCGCGCGCAAGGACCGCACGCCGGTGCTGGTGGCCACGGCG CGCGACGCGGTGGCCCAGCGCGTGCAGGGCCTGGACGCCGGTGCCGACGACTACGTGCTCAAGCCCTATGAACTGGACGA ACTGCTGGCGCGCATCCGGGCACTGGCACGGCGTGCGGCAGGGCGGGCCGAGCCGGTCTACGAGCACAAGGGCGTGGCCA TCGATCCGGCCACGCGCGAGGTGACGGTGAACGGAGAGCCCGTGGTGCTGTCCGGGCGCGAATGGGCGGTGCTGGAGCCG CTCATCGCCCGCCCGGGGCGCGTGCTCTCGCGCGCGCAGCTCGAGGAAAAACTCTACAGCTGGAAGGACGAGATCAGCAG CAATGCGGTCGAGGTCTATATCCACGGGCTGCGCAAGAAGCTCGGTGCGGACCTGGTGCTGAACGTGCGGGGCGTGGGCT ACATGGTGCCGAAGGTATGA Protein sequence : MRLLLVEDDTMIGEAVYDLLRAEQHAVDWVRDGEMADTALRTQTYDVVLLDLGLPRRDGLEVLRDLRARKDRTPVLVATA RDAVAQRVQGLDAGADDYVLKPYELDELLARIRALARRAAGRAEPVYEHKGVAIDPATREVTVNGEPVVLSGREWAVLEP LIARPGRVLSRAQLEEKLYSWKDEISSNAVEVYIHGLRKKLGADLVLNVRGVGYMVPKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 1e-22 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acav_3864 | YP_004236322.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 1e-18 | 44 |
