Gene Information

Name : Acav_3702 (Acav_3702)
Accession : YP_004236161.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4222585 - 4222971 bp
Length : 387 bp
Strand : +
Note : PFAM: Transposase IS3/IS911family; KEGG: ctt:CtCNB1_3809 transposase IS3/IS911

DNA sequence :
ATGACTAGACATACGGAGTCAGTAGAGGTAGTGGTGAAGGACCAGCGCCGCAGGCGCTGGTCCCTCGCAGAGAAGGCGGC
CCTGGTGCGCCGCACCTATGAACCAGGCATGAGTGTGTCGCTGGTGGCTCGCCAGGAAGGCGTCTCGGCGGGGCTGCTGT
TCCAGTGGCGCAAGCTCGAACGCCAGGGGGCCTTGACCGCTGTGTCTGCTGGCGAAGCCGGGGTGCCGGCATCCGAGCTG
GCTGCTGCTCGTGCGGAAATCGCCAAGCTCCAGCGCGTGCTCGGTAAGAAGACCCTGGAGAACGAAGTCCTCAAGGAAGC
CGTGGAGTACGCAGCCGAAAAAAAGTGGATTGCGCGCTCGCCCTTGTTGCCCGGGGACGACCAGTGA

Protein sequence :
MTRHTESVEVVVKDQRRRRWSLAEKAALVRRTYEPGMSVSLVARQEGVSAGLLFQWRKLERQGALTAVSAGEAGVPASEL
AAARAEIAKLQRVLGKKTLENEVLKEAVEYAAEKKWIARSPLLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-20 64
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 1e-20 64
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-20 64
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 5e-28 63
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 3e-28 63
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 3e-28 63
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 3e-28 63
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 5e-28 63
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 5e-28 63
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 5e-28 63
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-28 63
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-27 62
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-27 62
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-27 62
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 4e-16 52
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 8e-16 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acav_3702 YP_004236161.1 transposase IS3/IS911 family protein VFG0648 Protein 1e-28 63
Acav_3702 YP_004236161.1 transposase IS3/IS911 family protein VFG0609 Protein 4e-28 62
Acav_3702 YP_004236161.1 transposase IS3/IS911 family protein VFG0622 Protein 4e-28 62
Acav_3702 YP_004236161.1 transposase IS3/IS911 family protein VFG1733 Protein 2e-16 52