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Name : Acav_3468 (Acav_3468) Accession : YP_004235936.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 3939182 - 3940315 bp Length : 1134 bp Strand : + Note : PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; manually curated; KEGG: vap:Vapar_3108 riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-te DNA sequence : ATGTCCACGCCTGTCGCCCCGGCCTCTCTCCCTACCGATTTCATGCAACTTGCGCTCCGGCTAGCAGAAGAAGGGCTCTA CAGGACCTCCCCCAATCCCCGCGTGGGCTGTGTACTGGTCGATGCCCGCCAGCAGATCATCGGCCAGGGATCGACCCAGC GCGCCGGCGGGCCCCATGCAGAAGTGATGGCGTTGCGCGATGCCCGGGCACGCGGCCATGCCACCCAGGGCGCCATCGCC TACGTCACCCTGGAGCCCTGCTCCCACCACGGACGCACGGGGCCCTGCTGCGATGCGCTGGTCGAAGCTGGCATCGCCCG CGTGGTCGCCTCGCTGGGTGACCCCAACCCGCGAGTCGCCGGCCAGGGGTTCGAGCGCCTGCGCGCTGCGGGGGTCGAAG TGGAAGTCGGCCCGGGCGCAGAGGCCTCACGGGAGCTGAACATCGGCTTTCTCAGCCGCATGGTGCGGCGCATGCCCTGG GTGCGGCTGAAGTCCGCAGCGTCCCTGGACGGAATCACGGCACTGCCGGACGGGCAGAGCCAATGGATCACCTCCGCCGC GGCGCGGGCTGACGTGCATGCCTGGCGCGCGCGGGCCTGTGCGGTCCTCACGGGCGTGGGCACCGTGCTCGCGGACGATC CGCGGCTGGATGTGCGCGAGGTGCCCACCGAACGCCAGCCCTGGGTCGCGGTGCTCGACAGCCACTTGCGCACCCCGCCG GATGCCGCTTTGCTGCGAGCTCAAGCCCGTGACGTAGTGATCTATTGCGCGATCCGGGATGAATCGCGGGAGCGCGCGCT CTGCGCCTCCGGGGCGACCATCGTGCATCTGCCGGGTCCCGATGGGCGGGTTGCCTTGCGCGACGTGATGGCGGACCTCG CAGCGCGGGAGGCCAACGAGGTGCATGTTGAAGCAGGCGCCATCGCCAGCGGAGCGCTGTGCGCGGCCGGCCTGGTGGAC GAAGTGCTGCTCTATCTCGCCCCCAAGCTCCTGGGGCAAGGAAGAGGCATCGCGCCATTTGGCCCCCTTCCGGACCTGGG ACAGGCGCTCGGGCTCACCATCCGCTCGGTCGCCCAGGTCGGTCCGGACCTCCGGGTGTGCGCGAGGGTGGCAGGCCGGG AATCCGTGGCCTGA Protein sequence : MSTPVAPASLPTDFMQLALRLAEEGLYRTSPNPRVGCVLVDARQQIIGQGSTQRAGGPHAEVMALRDARARGHATQGAIA YVTLEPCSHHGRTGPCCDALVEAGIARVVASLGDPNPRVAGQGFERLRAAGVEVEVGPGAEASRELNIGFLSRMVRRMPW VRLKSAASLDGITALPDGQSQWITSAAARADVHAWRARACAVLTGVGTVLADDPRLDVREVPTERQPWVAVLDSHLRTPP DAALLRAQARDVVIYCAIRDESRERALCASGATIVHLPGPDGRVALRDVMADLAAREANEVHVEAGAIASGALCAAGLVD EVLLYLAPKLLGQGRGIAPFGPLPDLGQALGLTIRSVAQVGPDLRVCARVAGRESVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 3e-42 | 44 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 3e-42 | 44 |
