Gene Information

Name : Acav_3163 (Acav_3163)
Accession : YP_004235632.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3601998 - 3602954 bp
Length : 957 bp
Strand : +
Note : KEGG: xtr:100488233 porphobilinogen deaminase-like; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain

DNA sequence : 
ATGCACCCCACCTCTCCCTCCACGACCTCCGCCGCCTCCGTCCTCCCTCCCATCGTCATCGCCACGCGCGAAAGCCGCCT
CGCGCTCTGGCAGGCCGAGCACGTGCAGGCCCTGCTGCGTGCGCGCGGCCACGCCGTCGAACTGCTCGGCATGACCACCA
AGGGCGACCAGATCCTCGACCGCACCCTGTCCAAGGTGGGTGGCAAGGGCCTCTTCGTGAAGGAACTGGAAGTTGCGCTG
GAAGAAGGCCGTGCCCACGTGGCCGTGCATTCGCTCAAGGACGTTCCCATGGAACTGCCCGAGGGCTTCGAGCTGGCCTG
CGTGATGGAGCGCGAGGATCCGCGCGATGCCTTCGTCTCGCCCCGCCACGCCTGCCTGGCCGACCTGCCCCAGGGCGCCG
TGGTCGGCACCTCCAGCCTGCGCCGGCAGGTGCTGCTGCAGGCGCTGCGCCCCGACCTCGACATCCAGCCGTTGCGCGGC
AACCTCGACACCCGCCTGCGCAAGCTCGACGAAGGCCAGTACGACGCCATCGTGCTCGCGGCAGCGGGCCTCAAGCGCCT
GGGCATGGAAGACCGCATCCGCGCCCTGTTCGAGCCCGACGAGATGCTGCCGGCCGCCGGCCAGGGCGCACTGGGCCTGG
AGGTGCGCTCCGAGCGCCACGACCTGCTGCAGGCGGTGGCCCCGCTCGCGCACCAGGCCACCTGGCTCTGCGTGGCCGCA
GAGCGCGCCGTGAGCCGTGCACTGGGTGGCAGTTGCTCCGTGCCGCTCGCGGCCCACGGCCGGTGGACGGACGCCGGCAC
CCTGCGCCTGGACGGCGCCTGGGGCGACCCCGAAGGCATCCGCCCCCTGGTGCGCGTGCAGGTGTCCGCGCCGGTCGCCT
CTTTGCCCGAAGCCGAGGCGCTCGGCTCCGCCGTCGCGGCGCGGCTGCGCGCGGACGGCGCGCAGATCCCTGCCTGA

Protein sequence : 
MHPTSPSTTSAASVLPPIVIATRESRLALWQAEHVQALLRARGHAVELLGMTTKGDQILDRTLSKVGGKGLFVKELEVAL
EEGRAHVAVHSLKDVPMELPEGFELACVMEREDPRDAFVSPRHACLADLPQGAVVGTSSLRRQVLLQALRPDLDIQPLRG
NLDTRLRKLDEGQYDAIVLAAAGLKRLGMEDRIRALFEPDEMLPAAGQGALGLEVRSERHDLLQAVAPLAHQATWLCVAA
ERAVSRALGGSCSVPLAAHGRWTDAGTLRLDGAWGDPEGIRPLVRVQVSAPVASLPEAEALGSAVAARLRADGAQIPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-62 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-62 53