Gene Information

Name : Acav_2494 (Acav_2494)
Accession : YP_004234973.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2805245 - 2806867 bp
Length : 1623 bp
Strand : +
Note : KEGG: met:M446_0668 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGACAAAAACCCAGATCCTGGAAACCACCCCGGTGCAGACCTGCGCCGAAGCCGTGCTGTCAGTGCGCGGCCTGGGCAT
CGCCCTGCCGGGCGCCGCCGACCGTTCGCATGCAGTGCGCGACTTGTCCTTCGAGTTGCGGCGCGGCCAGACCCTGTGCC
TGGTGGGCGAGTCCGGCTCCGGCAAGTCGATGACGGCACTGGCCCTGATGGGTCTGCTGGACCCGGCCCTGCGGATCGAG
ACCGGCCAGGCGCTGTTCGAACAACAAAATCTGCTGGCCCTGCCCGAGCGGGCACGGCGCCGCCTGTCGGGCCGGCGCAT
CGCCATGATCTTCCAGGAGCCGATGGCGTCGCTCAATCCGGCGCAACGGATCGAAACGCAAATGGCCGAGGTGTTCCGGC
TGCATACCGATCTGCCGCGGGCCGAGGTGCGGATGCGGGTGCTGCGGCTGCTCGACGACGTCGGCCTGCCCGACCCCGAG
CGGCTGGCGCGCGCCTATCCGCACCAGTTGTCGGGCGGCCAGTGCCAGAGGGTCGCCATCGCCATGGCGATCGCGCTGGA
ACCGGCAGTGCTGATCGCGGACGAACCGACCACCGCGCTGGATGTCGGCAACCAGCGCCAGGTGCTCGAGCTGATCGCCG
GATTGCAACGGCGGCTGGGCACCGCCGTGCTGTTCATCACCCACGACTTGGGCGTGGTCGGCCAGATCGCCGACGAGGTG
GTGGTGATGCAGCACGGCCTCGCGGTCGAGAGCGGACCGGTCACCGAACTGCTCGACCGCCCGCGCCACGACTACACGCG
CCGGCTGATCGGTGCCATGCCCACGCTGACGCCGCGCCCCGCGCGCCCCAACACCCGGACATTGGTGCTGGAGGCCCGCG
GGCTGGGCAAACGTTATGCGAGCGGTGCCCGTACCGTCGTCGCCCTGGACGATGTCGAACTGTTGCTGCGGCGCGGGGAG
ACGGTGGCGGTGGTTGGCGAGTCGGGGTCGGGCAAGTCGAGCCTGGCCCGCGCCGTCGTCGGGCTGATGCCGCTGGACAC
GGGCACGGTGCGGGTGTCGGGCGAGGCCTTCAGCGGCGTCGATGCACGCAGGCTGCGCGGCCTGCGCAAGCGGGTGCAGA
TCGTCTTCCAGGACCCGTACAGCGCGCTCGATCCGCGTCAGACCGTCGGTGACGCCATCGCCGAGGGCGCGATCATCCAT
GGCATGCCGCCGGCCGAGGCACGGCAGCGCGCCGCCGGCTGGCTGGAGGCGGTCGGCCTGAGCGCCCGGGCGGCGCAGCG
TTATCCGCACGAATTCTCAGGCGGCCAGCGGCAGCGTGTCTGCATCGCCCGGGCGCTGGCGGTCGAGCCGGAACTGCTGA
TCGCCGACGAGTCGGTGGCCGCCCTGGACGTGTCGATCCAGCAGCAGGTGCTGGCCTTGCTCGCCGAACTGCAGGCCCGC
CTGTCCTTCGGCCTGCTGTTCATTACCCACGACCTGCGGGTGGCCAGCAGCATCGCCGACCGAATCGCCGTGATGCACCA
GGGGCGCATCGTCGAGACGGCGCCGCCGGACCTGCTGTTCTCGTCGCCCCGCCATGCCTACACGCGCCAGTTGCTGGCGG
CGCTGCCGAAGCGCCGGGACTGA

Protein sequence :
MTKTQILETTPVQTCAEAVLSVRGLGIALPGAADRSHAVRDLSFELRRGQTLCLVGESGSGKSMTALALMGLLDPALRIE
TGQALFEQQNLLALPERARRRLSGRRIAMIFQEPMASLNPAQRIETQMAEVFRLHTDLPRAEVRMRVLRLLDDVGLPDPE
RLARAYPHQLSGGQCQRVAIAMAIALEPAVLIADEPTTALDVGNQRQVLELIAGLQRRLGTAVLFITHDLGVVGQIADEV
VVMQHGLAVESGPVTELLDRPRHDYTRRLIGAMPTLTPRPARPNTRTLVLEARGLGKRYASGARTVVALDDVELLLRRGE
TVAVVGESGSGKSSLARAVVGLMPLDTGTVRVSGEAFSGVDARRLRGLRKRVQIVFQDPYSALDPRQTVGDAIAEGAIIH
GMPPAEARQRAAGWLEAVGLSARAAQRYPHEFSGGQRQRVCIARALAVEPELLIADESVAALDVSIQQQVLALLAELQAR
LSFGLLFITHDLRVASSIADRIAVMHQGRIVETAPPDLLFSSPRHAYTRQLLAALPKRRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 44
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-78 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-78 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-89 41