Gene Information

Name : Acav_2105 (Acav_2105)
Accession : YP_004234584.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 2348025 - 2348987 bp
Length : 963 bp
Strand : -
Note : PFAM: Transposase, IS4-like; Transposase InsH, N-terminal; KEGG: bmj:BMULJ_05861 ISBmu20 transposase

DNA sequence :
ATGAAGCAGCACAGCCTGGGCTTGGGAATGACGGCGAAGCGAACGCGGCGCCGGGAGTTTCTGGATGAGATGGAGAAGGT
CGTACCGTGGGCCGAGCTGGTGGCCCTGGTGTCGCCGTACCTACCCGAAGGCAGGCGGGGACGTCCTCCATTCCCATGCG
AGACCATGCTGCGCATCCATTTCATGCAGCAGTGGTTCGCGCTGAGCGACCCGGCCATGGAGGAAGCGTTGCACGACATG
CCGGTGTTTCGTGAGTTCGCAGGGCTCGGAGGCTGGGATGAGCGGTTGCCCGACGAGAGCACGATCCTGCGGTTCCGGCA
CGTGCTGGAGAAGCACAAGCTGGCGGTGCAAATCCTGCAGACCGTCAACGATCTGCTCAGCGCCAAGGGCATGATGCTCA
AGAGCGGCACGGTGGTGGACGCCACCTTGATCGCAGCACCCAGCTCGACCAAGAACAGCAGCGGCGAGCGCGACCCGGAG
ATGAAGCAAAGCCGCAAGGGGCAGCAGTGGTACTTCGGTATGAAGTGCCACATCGGAGTGGACGCCGACTCGGGCCTGGT
GCATACAGTGCGCGGCACCAGCGGCGCGGTCAATGACGTGATCGAGGCCAACAGTCTGCTGCGTGCAAGCGACCTCGATG
TTTATGCCGACGCTGGCTACCAAGGCGCCGGCCAACGTCCTGATTCCAGGCGCGACGTGAGCTGGCACATCGCCATGCGG
CCCGGCAAACGCCGCCTGCTGGATCCGTCCAAACCGATCGAGGCCTTGACCCGGCAACTCGAGCGCGTGAAGGCCGGCAT
CCGGGCGCGGGTCGAACACCCATTCCGAGTGCTCAAGCGCCAGTTCGGGCATGCCAAGGTACGCTACAGAGGACTGGCCA
AGAACACCGCGCAATTGCACACGCTGTTTGCGCTGGCCAATCTCTGGCTGGTACGGCGCAAATTGTTGGCTGCCTTGGCA
TGA

Protein sequence :
MKQHSLGLGMTAKRTRRREFLDEMEKVVPWAELVALVSPYLPEGRRGRPPFPCETMLRIHFMQQWFALSDPAMEEALHDM
PVFREFAGLGGWDERLPDESTILRFRHVLEKHKLAVQILQTVNDLLSAKGMMLKSGTVVDATLIAAPSSTKNSSGERDPE
MKQSRKGQQWYFGMKCHIGVDADSGLVHTVRGTSGAVNDVIEANSLLRASDLDVYADAGYQGAGQRPDSRRDVSWHIAMR
PGKRRLLDPSKPIEALTRQLERVKAGIRARVEHPFRVLKRQFGHAKVRYRGLAKNTAQLHTLFALANLWLVRRKLLAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 1e-71 56
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 2e-71 56
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 3e-84 56
unnamed AAO33449.1 putative transposase Not tested Not named Protein 5e-59 52
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 2e-64 49
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 2e-64 49