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Name : Acav_1810 (Acav_1810) Accession : YP_004234295.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2012598 - 2014964 bp Length : 2367 bp Strand : + Note : KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1 DNA sequence : ATGCAGCAGATCATCCGGCAACTGGCCACGGAAATCAGGGTGGGGGAACAGCAGGTCCGTGCGGCCGTGGATCTGCTGGA CGGCGGGGCCACGGTGCCCTTCATCGCGCGCTACCGCAAGGAGGCCACGGGTGGCCTGGACGATGTGCAGCTGCGCGAAC TGGAGGCGCGGCTCGCCTACCTGCGCGAACTGGAGGACCGCCGTGCCGCGGTGCTCAAGGCCATCGACGAGCAGGGCAAG CTGACCGATGCGCTGCGGGCCGCCATCGCCGCCGCGCCCACCAAGCAGGAACTGGAAGACATCTACCTGCCCTACAAGCA GAAGCGCCGTACCAAGGGGCAGATCGCGAAGGAGTTCGGCATCGAGCCGCTGGCCGACCGCCTGTTCGCGGACCCGACGC TCGACCCGGCCGTGGAGGCGCAGGCCTTCCTGCGCCCGCCCGAGGTGCTGGACGACGGCAAGCCGGGCGCCGATTTCTCC ACCGTGGGCGCGGTGCTGGACGGCGTGCGCGACATCCTTTCCGAGCGCTGGGCGGAAGATGCCGCCCTGGTGCAGTCGAT GCGGGAATGGCTCTGGACCGAAGGCCTGCTGCGCAGCAAGAAGGTGGAGTCGAAGAACGAGGCCGACCCGGAGGTGGCGA AGTTCCGCGACTATTTCGACTACGACGAACCCATCGGCCGCGTGCCGTCGCACCGCGCGCTGGCCGTGTTCCGCGGGCGG GCGCTGGAGATCCTGGAGGCCAAGCTCGTGCTGCCCGTGGAGCCCGAGCCCGGCAAGCCGAGCATCGCCGAGGGCCGCAT TGCGCTGCACCTGGGCTGGAGCCATGCGGGCCGGCCGGCCGACGACCTGCTCCGCAAGTGCGTGGCCTGGACGTGGCGCG TGAAGCTCAGCCTGTCCACGGAGCGTGACCTGTTCTCCCGCCTGCGCGAGGAGGCCGAGAAGGTGGCGATCAAGGTCTTC TCGGACAACCTGCGCGACCTGCTGCTGGCCGCACCTGCCGGCCCGCGTGCCGTGATGGGCCTGGACCCGGGCATCCGCAC CGGCGTGAAGGTGGCGGTGGTGGATGCCACCGGCAAGCTGGTGGAGACGGCCACGGTCTATCCCCACGAGCCGCGCCGCG ACTGGGAAGGCTCGCTGCACACGCTGGCGCGCCTCGTGCAAAAGCACGGCGTGCAGCTGGTGGCCATCGGCAACGGCACC GCGAGCCGCGAGACCGACAAGCTGGCTGCCGACTTGCTCAAGCTGGTGGCCAAGGCCGAGCTCAGTTTCGAGAAGGTGGT GGTGAGCGAGGCGGGTGCCTCCGTCTATTCCGCGAGCGAGTACGCGAGCCAGGAAATGCCCGACGTGGACGTGAGCCTGC GCGGTGCGGCAAGCATCGCCCGCCGGCTGCAGGACCCGCTGGCCGAGCTGGTGAAGATCGACCCGAAGAGCATCGGCGTG GGCCAGTACCAGCACGACGTGAACCAGAGCGAACTGGCGCGCACGCTGGACGCGGTCGTCGAGGATTGCGTGAACTCCGT GGGCGTGGACCTGAACACCGCGAGCGCGCCGCTGCTCTCGCGCGTATCGGGCCTGTCGGGCAGCGTGGCCAAGGCCGTGG TGCGCTGGCGCGAGGCCAACGGTGCCTTCCGCAGCCGGCGCCAGCTCATGGAGGTGGCGGGCCTGGGCGCGAAGACGTTC GAGCAGTCCGCCGGCTTCCTGCGCATCCGCGGGGGCGACAACCCGCTGGACATGACGGGCGTCCACCCGGAGACCTATCC GGTGGTGGAGCGCATCCTGGCGCACACGGCCAAGCCGGTGAACGAGGTCATGGGCCGCGCCGACATGCTCAAGCAGCTCA AGCCCGAGCTGTTCGCCAACGAGAAGTTCGGCGTGATCACGGTCCGGGACATCCTCGCCGAACTCGAGAAACCCGGCCGC GACCCGCGCCCGGACTTCAAGGTGGCACGCTTCAACGACGGCGTGGAGGACATCGCCGACCTGAAGGAGGGCATGGTGCT CGAGGGCACCGTGAGCAACGTTGCCCAGTTCGGCGCCTTCGTGGACCTGGGCGTGCACCAGGACGGCCTGGTCCACGTGA GCCAGCTCAGCCACAAGTTCGTGCAGGACGCGCGCGAGATCGTGAAGACCGGCGACATCGTGAAGGTGAAGGTGCTCGAG GTGGACCCGGTGCGCAAGCGCATCAGCCTGACCATGAAGCTCGACGCCGCGCCGGCGCGCCGGGACCAGGATGGCCGGGG CCCGCGCGAGAACCGCTTCGAAGGCGCCGGCCGCGGCTACGCCCAGCCTGCGCGCCGCGCGGCCGACCCGGCACCGCAGT CGGCCATGGCGTCGGCCTTCGCAAAGCTGCAGGGTCACAAACGGTAA Protein sequence : MQQIIRQLATEIRVGEQQVRAAVDLLDGGATVPFIARYRKEATGGLDDVQLRELEARLAYLRELEDRRAAVLKAIDEQGK LTDALRAAIAAAPTKQELEDIYLPYKQKRRTKGQIAKEFGIEPLADRLFADPTLDPAVEAQAFLRPPEVLDDGKPGADFS TVGAVLDGVRDILSERWAEDAALVQSMREWLWTEGLLRSKKVESKNEADPEVAKFRDYFDYDEPIGRVPSHRALAVFRGR ALEILEAKLVLPVEPEPGKPSIAEGRIALHLGWSHAGRPADDLLRKCVAWTWRVKLSLSTERDLFSRLREEAEKVAIKVF SDNLRDLLLAAPAGPRAVMGLDPGIRTGVKVAVVDATGKLVETATVYPHEPRRDWEGSLHTLARLVQKHGVQLVAIGNGT ASRETDKLAADLLKLVAKAELSFEKVVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGV GQYQHDVNQSELARTLDAVVEDCVNSVGVDLNTASAPLLSRVSGLSGSVAKAVVRWREANGAFRSRRQLMEVAGLGAKTF EQSAGFLRIRGGDNPLDMTGVHPETYPVVERILAHTAKPVNEVMGRADMLKQLKPELFANEKFGVITVRDILAELEKPGR DPRPDFKVARFNDGVEDIADLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVQDAREIVKTGDIVKVKVLE VDPVRKRISLTMKLDAAPARRDQDGRGPRENRFEGAGRGYAQPARRAADPAPQSAMASAFAKLQGHKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-178 | 56 |
