Gene Information

Name : Acav_1515 (Acav_1515)
Accession : YP_004234004.1
Strain : Acidovorax avenae ATCC 19860
Genome accession: NC_015138
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1689564 - 1690112 bp
Length : 549 bp
Strand : +
Note : KEGG: dac:Daci_3850 type VI secretion protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence : 
ATGGTGACCTTAAGCAAGACCGGCAAGAGCGGTCAGAAGTTCATTGCCCGCAACCGGGCCCCGCGCGTGCAGATCGAGTA
CGACGTCGAGATCTACGGCTCCGAGAAGAAGGTGCAGATTCCCTTCGTCATGGGCGTGATGGCGGACCTCTCGGGCAAGC
CGGTGGATCCCCTGCCGGAGATCGCGGACCGCAAGTTCCTCGACATCGACATCGACAACTTCGATGCCCGCATGAAGTCG
ATCAAGCCGCGTGCCTCGTTCAACGTGCCCAACACGCTGACGGGCGACGGCCGCCTGCACATCGACCTGACGTTCGAGAG
CATGGACGACTTCTCTCCCGCCTCGATCGCGCGCAAGGTGGGCGCCCTCAACTCCCTGCTGGAAGCCCGCACCCAGTTGC
ACAACCTGCTGTCGTACATGGACGGCAAGCAGGGCGCGGAGGAACTGATCGGCAAGGTGCTGAAGGACCCGGCGCTGCTC
AAGTCGCTGGCCGCGATGCCCAACCGGCCCGCCGGCGGCGTGACCGAGAAGACCGACGACGCTCAGTGA

Protein sequence : 
MVTLSKTGKSGQKFIARNRAPRVQIEYDVEIYGSEKKVQIPFVMGVMADLSGKPVDPLPEIADRKFLDIDIDNFDARMKS
IKPRASFNVPNTLTGDGRLHIDLTFESMDDFSPASIARKVGALNSLLEARTQLHNLLSYMDGKQGAEELIGKVLKDPALL
KSLAAMPNRPAGGVTEKTDDAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-58 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acav_1515 YP_004234004.1 type VI secretion protein VFG2069 Protein 1e-59 73