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Name : Acav_1219 (Acav_1219) Accession : YP_004233708.1 Strain : Acidovorax avenae ATCC 19860 Genome accession: NC_015138 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1362043 - 1363599 bp Length : 1557 bp Strand : - Note : TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type DNA sequence : ATGCTCCCCCCCCAGAATCCTTCCGCGCCCACCGCCGCCCCCTCCGACGACAACCAGCTCATCGCCGAGCGCCGCGACAA GCTCAAGTCCCTCCGGGAGGCCCAGGCACAAGGCAAGGGCGTGGCCTTCCCCAATGACTTCAAGCCCGCGCACCATGCGG CCGACCTGCAGGCGCAGTACGCGGAGACCGAGGCAGAGACGCTCGAAGCCAACCCCGTGCCGGTGAGCGTGGCCGGCCGC ATGATGCTCAAGCGCGTCATGGGCAAGGCCAGCTTCGCCACGGTGCAGGACGGCTCGCTCGGCGCCACCGGCGGCCGCAT CCAGCTCTACGTGACGCGCGACGCGATCGGCGAAGAGGCCTACGCAGCCTTCAAGCACTGGGACCTGGGCGACATCGTGG GCGCCGAAGGCACCCTCATGAAGACCAAGACCGGCGAGCTGTCGGTCAAGGTCACCACGCTGCGGCTGCTCACCAAGAGC CTGCGGCCGATGCCCGACAAGTTCCACGGCGTGGCCGACCAGGAAGTGAAGTACCGCCAGCGCTACGTGGACCTGATGAC CGACGAGGCGGCTCGCAAGCGCTTCATCGCGCGCAGCAAGGCCGTGAGCGGCATCCGCGAGTTCATGGTGCAGCACGGCT TCCTGGAGGTGGAGACGCCCATGCTCCACCCCATTCCCGGCGGTGCCAACGCCAAGCCGTTCGTCACGCACCACAACGCG CTGGAGCAGGAGATGTACCTGCGCATCGCGCCCGAGCTCTACCTCAAGCGCCTGGTGGTCGGCGGCTTCGAGCGCGTGTT CGAGATCAACCGCAACTTCCGCAACGAAGGCATCTCGGTGCGCCACAACCCCGAGTTCACGATGATGGAGTTCTACGCGG CCTACTGGAACTACCGCGACCTGATGGACTTCACCGAGCAGCTCGTGCGCGATGCGGCCACGAAGGCGGCGGGCAGCCTG CAGCTGACCTACCAGGGCCGTGCAGTGGACCTATCGCAGCCCTTCGAGCGCCTGACCATCCGCGAGGCCATCCTGCGCCA CACCGAGGCCGGCGAAGGCGTGGACGATGCCGCCTGGCTGGTCGCCGCGCTGCGCAAGCTGGGTCTCTCGGAGGAGAAGG ACCGCCTGTCCACGCGCACGCTGGCAGGCCTGCAGGTGCTCTACTTCGAGGAAACGGTGGAGGACAAGCTCTGGCAGCCC ACCTTCATCATGGAACACCCGACCGAGATCAGCCCGCTGGCACGCGCCAACGACACGCGCCCCGAGGTGACGGAGCGCTT CGAGCTCTACATCACGGGCCGCGAGTTCGGCAACGGCTTCTCCGAGCTCAACGACGCGGAAGACCAGGCCGCACGCTTCC AGTCCCAGGTGGAGGCCAAGGACAGCGGAGACGACGAGGCCATGTATTTCGACCACGATTTCGTCCGCGCCCTCGAATAC GGCATGCCTCCCACCGGTGGCTGCGGCATCGGCATCGACCGGCTTATGATGCTGTTGACCGACAGCCCCAGCATCCGCGA CGTGATTCTGTTCCCCGCCCTGCGCCGGGAACATTGA Protein sequence : MLPPQNPSAPTAAPSDDNQLIAERRDKLKSLREAQAQGKGVAFPNDFKPAHHAADLQAQYAETEAETLEANPVPVSVAGR MMLKRVMGKASFATVQDGSLGATGGRIQLYVTRDAIGEEAYAAFKHWDLGDIVGAEGTLMKTKTGELSVKVTTLRLLTKS LRPMPDKFHGVADQEVKYRQRYVDLMTDEAARKRFIARSKAVSGIREFMVQHGFLEVETPMLHPIPGGANAKPFVTHHNA LEQEMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTEQLVRDAATKAAGSL QLTYQGRAVDLSQPFERLTIREAILRHTEAGEGVDDAAWLVAALRKLGLSEEKDRLSTRTLAGLQVLYFEETVEDKLWQP TFIMEHPTEISPLARANDTRPEVTERFELYITGREFGNGFSELNDAEDQAARFQSQVEAKDSGDDEAMYFDHDFVRALEY GMPPTGGCGIGIDRLMMLLTDSPSIRDVILFPALRREH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-133 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acav_1219 | YP_004233708.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-133 | 54 |
