Gene Information

Name : BC1001_4394 (BC1001_4394)
Accession : YP_004230853.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase subunit
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 887994 - 889178 bp
Length : 1185 bp
Strand : -
Note : TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bam:Bamb_4319 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein

DNA sequence :
ATGACTGACCGCCTGAAGATCGCGCACCTGTACAAGGTGTTCTCCGACCGTCCTGAAGCCGCGATGAAAATGCTTGAGCG
CGGTGCGAACAAGGCAGATGTGCTACGGGAGACTGGCCAGGTCGTCGGCCTTGACGATGTATCGCTATCCGTTCCGGCCG
GCGCCATGTACATGATTATGGGACTGTCGGGTTCCGGAAAGTCAACACTTGCGCGCTGCGTGAACAGGCTGAACGAGCCG
AGCAGCGGTCAGATTCTTCTCGACGACATCGACGTCTGCAAGCTTAATGAAGCTGGCTTGCGCGACGTTCGACGTAACCG
GATTTCGATGGTATTTCAGCATTTCGCGTTACTTCCTAATCGCCGCGTGGTCGAGAACGTTGAATTTGGATTGAAGCTCC
GTGGCATGGCATCTTCTGAGCGCCGCAAACGCGCTGAACAGGTACTTGAGGTTGTCGGGCTGGCCCGCTGGGCGCAGAAG
ATGCCTCACGAACTCAGCGGCGGAATGCGGCAACGTGTCGGGCTCGCTCGAGCGCTTGCGACTGACGCAGATGTGCTGAT
TATGGACGAAGCATTCAGCGCGCTTGACCCATTGATCCGTGCTGAAATGCAGGACGAACTGTTGCGTCTGCAGCGGACCT
TGAACAAGACGATCCTGTTCATTACTCACGATTTTCAGGAAGCTCTCAAGCTCGGTACGCGTATCGCGATCATGTCCGAG
GGGAAGCTCGTGCGTGAGGGCACTCCGCAGTCGATCGTGCTCCAGCCTGGTAGTGACTACGTTGCAGCATTCACGCGCGA
TGTGGACCGTGCGCGCCTGTTCAACGCAGGTTCTTCCATGACGTCGCTTGTGCCGATGGTGAAACGCGACGAATTCGTCG
TGCTGGCCTGCGAAGGCGAAGCGGGCGGTCAAGCGTTCGTCATTGATACCGACGAGCACGTCCTGGGTACGTTACCGGCG
GCGCGCATCGCCGAGTTGCGCGATGGTGCGCCTCTTCCTCCGCTTTCTGCGGCCTTCGCGTGCGTTCCCACTCAAGCCCG
TCTGATTGACGTCGCAGCCAAATTTAGCCGCGCCGACGCAATCGGCGTGACCGATGAAACGGGCCGACTCGTAGGTCGGC
TGGAAGCGGGGCAAGTTCTCGCGCGCATCGGCGCCGATGGTGCCAATGGAGCAAGCCATGTTTAA

Protein sequence :
MTDRLKIAHLYKVFSDRPEAAMKMLERGANKADVLRETGQVVGLDDVSLSVPAGAMYMIMGLSGSGKSTLARCVNRLNEP
SSGQILLDDIDVCKLNEAGLRDVRRNRISMVFQHFALLPNRRVVENVEFGLKLRGMASSERRKRAEQVLEVVGLARWAQK
MPHELSGGMRQRVGLARALATDADVLIMDEAFSALDPLIRAEMQDELLRLQRTLNKTILFITHDFQEALKLGTRIAIMSE
GKLVREGTPQSIVLQPGSDYVAAFTRDVDRARLFNAGSSMTSLVPMVKRDEFVVLACEGEAGGQAFVIDTDEHVLGTLPA
ARIAELRDGAPLPPLSAAFACVPTQARLIDVAAKFSRADAIGVTDETGRLVGRLEAGQVLARIGADGANGASHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 5e-73 42