Gene Information

Name : BC1001_3679 (BC1001_3679)
Accession : YP_004230152.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 86417 - 88324 bp
Length : 1908 bp
Strand : -
Note : KEGG: bxe:Bxe_B2596 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879

DNA sequence :
ATGGATCCCGACTTTCCGAAGTATTTCCAGAAGCAGCTGCGCTACATCACGGAGTCTTTCAGCGGCGAATTTGCAGCGAA
GCATCCGAAGGTCGCGGCGCGGCTGGGCGCGCGTGCGGGCGAGGTTCGCGATCCATATGTGCAACGGCTGCTGCAGTCGT
TTGCCTTCACGGCGGCGCGTGCCGAGATGAACATCGATCGCATGGCCGATCCGTTTATCCTGCGGCAGCTCGAGGCGGTG
AATCAGAACTACGTGGCGCCGCTGCCGTCCATGGCGGTGGTGCGCTTTTACCCCGACCTCGAAGCGGCGCATAGTCCGCA
GGGGCATCTTCTGCCGCGCGGTACGCAACTGACCCTCTGCAAAGGGCAAGACGGTCGTACCGCCAGCCAGTTCCGCACGA
GCCAGGACGTGAGGCTCTGGCCGCTGCGCATCGAGTTCGCCCGGCCCGCCGGCGTGCCGGCGGACGTGCCGCTGCTGCAT
CGCTATGTGGCCGATCTGTCGAAGGTGCGTGGGGCACTGCGCCTGCGCTTTTCGACCATCAACGGCACGCCTTTGCGCGA
GCTTCGCGGTCTGGATCGTCTGCCGGTTTACCTGTGCGGCGAGGCGCGCCTGGCGTCGCAGCTGTTCGAGCTCATCCACA
CGTCGGTAATCGGCATGGTGATGGGCGTGCCAGGCGCATTCGAGACGGGCGAGCTGTATGGCATGAGGCAGCCCAACCTG
CCGCAAATGGGCATCGACTATGAGGGGCTGGAGCCGCAGCAGAGCATGCTGCGTCCGGTGTATCCCCGTTTCCACGGGCA
TATGCTGGTCCATGAGTACTTCGCGTGTCCGCCACGATTCTGGTTCTTCGCCCTCACCGGATTGCAGGCGGGGCTCCGGC
AACTCCCAGGCAGTTCGGTCGAAATCATCCTGCTTCTTTCGCGCGAGGCGGCGACGCTGGATCAGCAGGTCGACGCCTCG
CAGTTCGCGCTTGGCTGCACGCCTGCGGTCAACCTCTTCGAGGCCAGCTCGGAAAGGCTTTGCATCGACCCGGGGCAGGA
CGAGCACCGGCTGGTGCCCTTCGTGGCTGCGCCCGACGACTTCGAGGTGCACTCGGTCAATTCGGTGGAAGGGCAGTTCG
ACGACGAATCGGAAGTCGTCCGCTTTGAACCGCTGGACGCGGCACTGCCCGACGACACGCTGCGCGATGCGCGGTTTTTC
ACGCTGCGGCGCGAACTGCATAAAGCGGCCGACAGCGAGCGCCGTTACGGCACGCTGCGCGACTTCGTTCGCACCCGTCT
CTACCTGAGGCTTCTCGCGCGCGATCACCAGCCCGGCAATGCGCGCATCCGGCACCTGACGCTCAACGCATGGCTCACCA
ACGGCAACCTGCCGTGCGTTACCCCGCCGAACGGCGTCGACGATCTCGTCGTGAAGGACGCGAAGGCGGTGGCGGCGGTC
GGTTTTGTGCGCGCGCCGACAGCGCCCCGGCCCCCGCTTGCCCGTGGCGATGCCGCCTGGAACCTGCTGCGTCAGCTCAC
GCTCGAGTACGGCGTCTTCGACGACGACTTCAGCGAGCCGTCTCCCGGCGAGGTCCTGCGCGAGACGCTGCGCCCCTATC
TCGGTGCGGGGGAGGCGTCCGTCATGGCGCGGCAGCTCGACGGCCTGATCGGCGCCGCGGCGCAGCCCGTGCACGCCGTC
CACCGCTGGGATGGGGACCCGCAGCACGCGCGGGGCATCGAAGTGCGGCTTACCTTCGACGAGGAAGGCTTCGACGGCGG
CTCGCCGTTTACGTTCGCACTTGCGCTAGAGCGTTACGTGGCGGCCTACGTGTCCGGGCATTCGTTTACGCGCACCGCAC
TGTGCACAAAGCAGCGCGGCCTGATCTACACCTGGCCCACGCGCGATGGCTCGCGCCAGGTCTTGTGA

Protein sequence :
MDPDFPKYFQKQLRYITESFSGEFAAKHPKVAARLGARAGEVRDPYVQRLLQSFAFTAARAEMNIDRMADPFILRQLEAV
NQNYVAPLPSMAVVRFYPDLEAAHSPQGHLLPRGTQLTLCKGQDGRTASQFRTSQDVRLWPLRIEFARPAGVPADVPLLH
RYVADLSKVRGALRLRFSTINGTPLRELRGLDRLPVYLCGEARLASQLFELIHTSVIGMVMGVPGAFETGELYGMRQPNL
PQMGIDYEGLEPQQSMLRPVYPRFHGHMLVHEYFACPPRFWFFALTGLQAGLRQLPGSSVEIILLLSREAATLDQQVDAS
QFALGCTPAVNLFEASSERLCIDPGQDEHRLVPFVAAPDDFEVHSVNSVEGQFDDESEVVRFEPLDAALPDDTLRDARFF
TLRRELHKAADSERRYGTLRDFVRTRLYLRLLARDHQPGNARIRHLTLNAWLTNGNLPCVTPPNGVDDLVVKDAKAVAAV
GFVRAPTAPRPPLARGDAAWNLLRQLTLEYGVFDDDFSEPSPGEVLRETLRPYLGAGEASVMARQLDGLIGAAAQPVHAV
HRWDGDPQHARGIEVRLTFDEEGFDGGSPFTFALALERYVAAYVSGHSFTRTALCTKQRGLIYTWPTRDGSRQVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 2e-112 43