Gene Information

Name : BC1001_3653 (BC1001_3653)
Accession : YP_004230126.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 56154 - 58238 bp
Length : 2085 bp
Strand : -
Note : TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: bgf:BC1003_3712 transketolase; SMART: Transketolase central region

DNA sequence :
ATGCAAAACGATCCCGCCCTCGATCAGTTGTGCATCAATACGATCCGCACGCTGTCGATGGACGCTGTTCAGAAGGCCAA
TTCCGGCCACCCCGGCACGCCCATGGCGCTGGCGCCGGTCGCCTACCATCTGTGGCAAAACCATTTGCGCTATGACCCGG
ACGAGCCGCTATGGCCCAATCGCGACCGCTTCGTGCTGTCGGTCGGACATGCGTCGATGCTGCTGTATTCGCTGCTGCAT
CTCGCGAACGTGAAGGCCGTCGACGAAGACGGCAAGCCGACCGGGCAACCGGCAGTGTCGCTCGAGGACATTGAGCGTTT
CCGGCAGATCGACAGCAAAACCCCCGGTCACCCGGAGTACCGCATGACGACCGGCGTCGAAACGACCACGGGTCCGCTCG
GCCAGGGCCTCGGCAACAGCGTCGGTATGGCGATGGCGGCGCGCTGGTACGAGAACCGTTTCAACAAACCGGACGCGCCG
CTCTTCGATTACCGCGTCTATGCGCTGTGCGGCGACGGCGACATGATGGAAGGCATCTCGCACGAAGCGGCCTCGCTCGC
GGGGCATCTGAAGCTCTCTAACCTGATCTGGATCTACGACAGCAATCGCGTGACGATCGAAGGGCACACCGATCTCGCCT
ATAGCGACGACGTCGAAAGCCGTTTTCGCGGTTACCACTGGCATACGCTGCACGTCGACGATGCAAACGACGCGGCGGCG
CTCGAAGCAGCGCTCGTCGAGGCCAAAAGCGTGACGGACAGGCCGACGCTGATCGTAGTCAACAGCATTATCGGCTGGGG
CTCGCCGAACAAGCAGGACAGCGCCGCCGCGCACGGCGAAGCGCTCGGCGTGCAGGAAGTCGCGCTCACCAAGAAGTTTT
ACGGCTGGCCCGAAGACAAATTCTTCTATGTGCCCGATGGCGTGCACGAGCGCTTTGCCGAGGGCATCGGTGCGCGCGGC
AAGGCGGCGCGCGAGGAATGGCAGGCGAAATACGACGCCTACAGTAAGCAATACCCGGAACTGTCGCGCGAATTCGCGCT
GATCGAAGCGCATGAATTGCCGGTCGGCTGGGACAACGACATTCCGACATTCGACGCGGACCCGAAGGGCATGGCCTCGC
GCGAGTCGTCCGGCAAAGTGCTGAATGCGATTGCGGCGCGTGTGCCGTGGATCATCGGCGGCGCGGCCGATCTTTCGCCG
TCCACGAAAACGAACCTTAAATTCGAGGGTGCGGGCAGCTTCGAATACGACAACTACGGCGGCCGTAATCTGCATTTCGG
CATTCGCGAGCACGGCATGGGCGCGGTGGTCAACGGTCTCGCGTTGTCGAATTTGCGCCCGTATGGTTCCACGTTCCTGA
TTTTCAGCGACTACATGAAGCCGCCGATTCGCCTCTCCGCGATCATGGAAGTGGAGGCCATCTACGTCTTCACGCACGAC
TCCATCGGCGTCGGTGAAGACGGCCCGACGCATCAGCCGATCGAGCAGCTCGCGTCGCTGCGCGGCGTGCCGGGCCTCAC
GGTGCTGCGTCCGGGCGATGCGAACGAGGTGGCACAAGCGTGGCGCGTTGCGCTGATGCAAAAGCGTCGTCCTGCGTGCA
TCGTTGTGTCGCGCCAGCCGCTGCCGACGCTCGACCGCAGCCGCTATGCGTCCGCCGAAGGCGTGAAGAAGGGCGCCTAT
GTGCTCGCCGACGCACCGGACGGCCAGAAGCCGCAAGTCATTCTGCTTGCCACCGGCAGCGAGCTTTCAATTTGTGTCGA
TGTCTACGAGAAGCTGAAAGCCGACGGCATTGCGGCGCGCGTCGTCTCGATGCCCTCATGGGACCTGTTCGAGCGGCAGG
ATGAGGCGTATCGCGACGCGGTCTTACCACCGGATGTCGATGCGCGCGTGGCCGTCGAGCAGGCGGCGACGCTCGGCTGG
GACCGCTACGTCGGCAGGCTCGGCGCGCAGGTGGTGATGCATACGTTCGGCGCGTCCGCGCCGCTGGCGGATCTGAAGAA
GAAGTTCGGCTTCACGCCCGAGCATGTCTATGAAGCCGCGAAGCAGCAGATTGCGCGAGTGCAAGGCCAGCGAAAGGGCG
GTTAG

Protein sequence :
MQNDPALDQLCINTIRTLSMDAVQKANSGHPGTPMALAPVAYHLWQNHLRYDPDEPLWPNRDRFVLSVGHASMLLYSLLH
LANVKAVDEDGKPTGQPAVSLEDIERFRQIDSKTPGHPEYRMTTGVETTTGPLGQGLGNSVGMAMAARWYENRFNKPDAP
LFDYRVYALCGDGDMMEGISHEAASLAGHLKLSNLIWIYDSNRVTIEGHTDLAYSDDVESRFRGYHWHTLHVDDANDAAA
LEAALVEAKSVTDRPTLIVVNSIIGWGSPNKQDSAAAHGEALGVQEVALTKKFYGWPEDKFFYVPDGVHERFAEGIGARG
KAAREEWQAKYDAYSKQYPELSREFALIEAHELPVGWDNDIPTFDADPKGMASRESSGKVLNAIAARVPWIIGGAADLSP
STKTNLKFEGAGSFEYDNYGGRNLHFGIREHGMGAVVNGLALSNLRPYGSTFLIFSDYMKPPIRLSAIMEVEAIYVFTHD
SIGVGEDGPTHQPIEQLASLRGVPGLTVLRPGDANEVAQAWRVALMQKRRPACIVVSRQPLPTLDRSRYASAEGVKKGAY
VLADAPDGQKPQVILLATGSELSICVDVYEKLKADGIAARVVSMPSWDLFERQDEAYRDAVLPPDVDARVAVEQAATLGW
DRYVGRLGAQVVMHTFGASAPLADLKKKFGFTPEHVYEAAKQQIARVQGQRKGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-127 46
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-132 46