Gene Information

Name : BC1001_3863 (BC1001_3863)
Accession : YP_004230334.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 303585 - 304367 bp
Length : 783 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5545 short-chain dehydrogenase/reductase SDR

DNA sequence :
GTGCTGCTCAAGGACAAGGTGGTGATCGTCACCGGCGGCTCGCGCGGCATCGGGCGCGCCATAGCCGTTGCGTGCGCAAC
GGAAGGCGCCGACGTCGCAATCAACTACTGGGGCGATAACGACGCATCGTATGGGCGCCGTTCCGCCGTCGCCGAAGTGG
TCGAAGAGATCGAGGCACTCGGGCGGCGCGTCATTGCGATAGAAGGCAACGTGGCCGCGCGCGAAACCGGGCAACAGCTG
GTGCAGCGGACCGTTGAAGCATTCGGCAAGGTCGACGTGCTGGCAAGCAACGCCGGCATCTGTCCGTTCCACGCGTTTCT
CGACATGCCTGCGGACGTGCTCGAATCGACAGTCGCAGTGAATCTGAACGGCGCGTTCTACGTCACGCAAGCCGCTGCGC
AGCAAATGAAAGCGCAAGGCACGGGCGGCGCCATTGTCGCGACGAGTTCGATCAGCGCTTTGGTGGGCGGTGGCATGCAG
ACGCACTACACGCCGACCAAAGCGGGCGTTCATTCGCTGATGCAATCGTGCGCGGTCGCATTGGGGCCGTACGGCATCCG
CTGCAATTCGGTCATGCCGGGCACGATCGCGACGGACCTGAACGCCGAAGATCTCGCCGACGAAGCGAAGAAAGCCTACT
TCGAAAAGCGCATTCCGCTCGGGCGCCTCGGCCGCCCTGAGGACGTTGCCGAATGCGTGGTGTTTCTCGCGTCCGACCGT
GCGCGCTATGTGACGGGCGCGGCGTTGCTCGTCGACGGTGGCCTGTTCGTCAATCTGCAATGA

Protein sequence :
MLLKDKVVIVTGGSRGIGRAIAVACATEGADVAINYWGDNDASYGRRSAVAEVVEEIEALGRRVIAIEGNVAARETGQQL
VQRTVEAFGKVDVLASNAGICPFHAFLDMPADVLESTVAVNLNGAFYVTQAAAQQMKAQGTGGAIVATSSISALVGGGMQ
THYTPTKAGVHSLMQSCAVALGPYGIRCNSVMPGTIATDLNAEDLADEAKKAYFEKRIPLGRLGRPEDVAECVVFLASDR
ARYVTGAALLVDGGLFVNLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-29 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 7e-30 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-29 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-29 41