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Name : BC1001_6053 (BC1001_6053) Accession : YP_004232474.1 Strain : Genome accession: NC_015137 Putative virulence/resistance : Virulence Product : type III secretion protein, HrcV family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 2746313 - 2748409 bp Length : 2097 bp Strand : + Note : KEGG: bgf:BC1003_3639 type III secretion protein, HrcV family; TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein DNA sequence : ATGTTCAAGACACTTAAGCTGCCCGCCGGCGGCGAAATCGGCATCGCGATGCTGGTGGTCGCGATCATCTCGCTGATGAT CCTGCCGCTGCCGCCGTTTCTCATCGACATCCTGCTCGCCATCAACATCACGATCAGCGTGACCTTGTTGATGGTGACCA TGTATGTGCCGAACGTGGTGTCGCTTTCCGTGTTTCCGTCGCTGCTGCTGTTCACCACGTTGTACCGTCTGTCGCTCAAC ATTGCATCGACCAAGTCGATCCTGCTGCATGCCGATGCGGGCAATATCATCGAAAGTTTCGGCGAGCTGGTGGTGGGCGG CAACCTCGTGGTCGGCATGGTCGTGTTCGTCATCATCACGACCGTGCAGTTCATTGTGATCGCGAAGGGCTCCGAACGCG TGGCCGAAGTCGGCGCGCGCTTCACGCTCGACGCGTTGCCCGGCAAGCAGATGAGCATCGACGCCGATTTGCGCGCGAAT CTGCTCACGCCCGAAGAGGCTCGCCGCAAGCGCGCCACGCTGGCGGTCGAAAGCCAGTTGCACGGCGGCATGGACGGCGC GATGAAGTTCGTCAAGGGCGACGCGGTGGCCGGGCTCATCATCACGCTGATCAATATCATTGCGGGCATTGCGGTGGGCG TCGCGTATCACGACATGTCGGCGGGCGAGGCGGCGAACCGCTTTTCGATTCTCTCGGTCGGCGACGCGATGGTCTCGCAG ATTCCTTCGCTGCTGCTCTCGGTGGCCGCGGGCGTGATGATCACGCGTGTCTCCGACGAACGCGACGCGCGACCGCTGTC GCTCGGCGACGAAATCGGCCGGCAGCTTTCGGCCAGCGCCCGCGCGCTCTACTTCGCGAGCCTGCTGCTGCTCGGCTTCG CCGCCGTGCCCGGCTTCCCGAGTTCGCTGTTCCTGCTGCTCGCGGCGATCCTCGCGTTTTGCGGCCACCGGCTCGGCAAG CGCAAGCCCGCGGCCACGACGCATGCCGGCGAAGCCGTCAACGCGATGCAGCGCGCCGGCTCGAAAGCGGAGACGCCCGC CATCCTCACGCGCGCGCCGCAATTCACCTGTCCGCTCGGCGTGCGTATTTCGCCCGACCTGGTCGCGCGCCTGTCGACCG CCGCGCTCGACCGCTCGTTCGAAACGGAACGCGCACGTCTGCAGGAGTATCTCGGCTTGCCGTTTCCCGGCATCACGATG TGGACGAGCGACGCATTGCCCGCATCGAGCTGCGAACTGCTGATGCACGACGTGCCCTATTGCGCGATCGAATTGCCGCC CGGCAAGGTGATGCTGCCGGACCCGGCGCTCACCGGCACGCGCGAGCCGCTTTCCGCCGACGCCGAAACGCTCGCCGCCG GCGCCGATGCGCGGGCTGAAAAGCGCCGCGGACTCGACGGCGGTCCGGGGCCCACATGGTGGATCGACGAAAAGAGCTTG CCGCCGAAGCAACCGGCGTGGCGCGCCGAGCAGGTGATCGCGCATGCCTCCGTGGCGATGTTGCGCAAGCACGCGTCGCT CTTTCTCGGCATTCAGGAAGTGCAGTGGATACTCGATCAGCAGAACGCCGAATATCCCGGTCTCGTCGCGGAAGTGCAGA AAGTGCTGCCGCCGCAGCGCATTGCCGACGTGCTGCGGCGGCTGTTGGAAGAGCAGATTCCGATTCGCAACGTCCGCAAT ATTCTGGAGAGTCTCGTCGTGTGGGGCGCGAAAGAAAAGGACATGCTGATGCTGACCGAATATGTGCGCGGGGACCTCGC GCGCTTTCTCGCGCATCGCGCGGCGGGCGCCGGGCGGCAATTGCCCGCGGTGCTGTTCGATCTGCCGGTCGAACAGCATA TCCGCCAGGCCATCAAGCAGACGCCGACGGGCAACTTCCTCGCGCTGCCGCCCGACGAAGTCGGTTTCCTGATCGACCGG ATCCAGTCTTTTGTCGGCGATACGCCGCGTGACGGCGTCGCGCTCGTCACGTCGATGGACATTCGCCGCTACGTGCGCCG CATGATCGAGGCGCGGCTCGGCTGGCTCGCCGTGTACTCGTATCAGGAACTCGGCGAGCACGTCGAACTGCAGCCGCTCG GCCGCGTGACGATCTAG Protein sequence : MFKTLKLPAGGEIGIAMLVVAIISLMILPLPPFLIDILLAINITISVTLLMVTMYVPNVVSLSVFPSLLLFTTLYRLSLN IASTKSILLHADAGNIIESFGELVVGGNLVVGMVVFVIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN LLTPEEARRKRATLAVESQLHGGMDGAMKFVKGDAVAGLIITLINIIAGIAVGVAYHDMSAGEAANRFSILSVGDAMVSQ IPSLLLSVAAGVMITRVSDERDARPLSLGDEIGRQLSASARALYFASLLLLGFAAVPGFPSSLFLLLAAILAFCGHRLGK RKPAATTHAGEAVNAMQRAGSKAETPAILTRAPQFTCPLGVRISPDLVARLSTAALDRSFETERARLQEYLGLPFPGITM WTSDALPASSCELLMHDVPYCAIELPPGKVMLPDPALTGTREPLSADAETLAAGADARAEKRRGLDGGPGPTWWIDEKSL PPKQPAWRAEQVIAHASVAMLRKHASLFLGIQEVQWILDQQNAEYPGLVAEVQKVLPPQRIADVLRRLLEEQIPIRNVRN ILESLVVWGAKEKDMLMLTEYVRGDLARFLAHRAAGAGRQLPAVLFDLPVEQHIRQAIKQTPTGNFLALPPDEVGFLIDR IQSFVGDTPRDGVALVTSMDIRRYVRRMIEARLGWLAVYSYQELGEHVELQPLGRVTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-84 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1001_6053 | YP_004232474.1 | type III secretion protein, HrcV family | VFG0064 | Protein | 3e-84 | 43 |
| BC1001_6053 | YP_004232474.1 | type III secretion protein, HrcV family | VFG0384 | Protein | 2e-83 | 42 |
| BC1001_6053 | YP_004232474.1 | type III secretion protein, HrcV family | VFG0198 | Protein | 1e-81 | 41 |
