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Name : BC1001_6044 (BC1001_6044) Accession : YP_004232465.1 Strain : Genome accession: NC_015137 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 2738288 - 2739103 bp Length : 816 bp Strand : - Note : KEGG: bgf:BC1003_3630 type III secretion protein SpaR/YscT/HrcT; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein DNA sequence : ATGTATGACACGCTCACCACGCTGCCGCAGTTCGGCGCCACGCTGATTCGCTCGCTGACGGTGCTCGGCGTGTGCTCCGT GCGGCTCTTCGTGATGCTCTACCTGTTTCCGCCCACCGCGGACGGCATCCTGCAAGGCGTGGTGCGCAACGGCCTCGTGC TTCTGTTCAGCTCGTTTATCGCTTACGGTCAGCCAGTTTCGCTTTATACGTCGCTGACCGGCACGGCGCTCGTCGTCATC GGCTTGCGCGAGGCGGCCATCGGACTGCTGCTGGGGTTCGCGGCCTCCACGGTGTTCTGGGTGGCAGAAGGCGCCGGCAT TTACGTCGACGATCTGGCCGGTTACAACAACGTGCAGATCACCAACCCGCTGCGCGAGGAACAGTCCACGCCGACGGGCA CGCTGCTCGCACAGGTGGCGAGCGTCGCGTTCTGGACCTTCGGCGGCATGACCTTCCTGCTCGGCGCGCTTTATGAGTCG TATCACTGGTGGCCGCTGACCGCCGCGACGCCGGTGCCCGCGAACGTGCTGGAAAGCTTTGTGCTGCAGCAGACCGATTC GCTGATGCAAACCACCGCCAAGCTCGCCGCGCCGATGATGCTGATGCTGCTGCTCGTCGATTTTGCGTTCGGCTTCGCGG CGAAGTCGGCGCAAAAACTCGAACTGATGACGCTCAGTCAGCCGGTGAAGGGCGCGCTCACGGTGATGATGCTCGCGCTC TTCGTGGGCATTTTCGTCGACCAGGTCCGCGACCAGCTGGTGCTGTCGGGTCTTGGCGAGCAGTTGCGCACGATCGCCGG CGCGGTTCGCCACTAG Protein sequence : MYDTLTTLPQFGATLIRSLTVLGVCSVRLFVMLYLFPPTADGILQGVVRNGLVLLFSSFIAYGQPVSLYTSLTGTALVVI GLREAAIGLLLGFAASTVFWVAEGAGIYVDDLAGYNNVQITNPLREEQSTPTGTLLAQVASVAFWTFGGMTFLLGALYES YHWWPLTAATPVPANVLESFVLQQTDSLMQTTAKLAAPMMLMLLLVDFAFGFAAKSAQKLELMTLSQPVKGALTVMMLAL FVGIFVDQVRDQLVLSGLGEQLRTIAGAVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB8 | YP_198732.1 | protein HrpB8 | Virulence | Hrp PAI | Protein | 2e-48 | 51 |
| hrpB8 | BAB07850.1 | HrpB8 | Virulence | Hrp PAI | Protein | 1e-48 | 51 |
| hrpB8 | AAF61279.1 | HrpB8 | Virulence | Hrp PAI | Protein | 1e-48 | 51 |
| hrcT | AAP34337.1 | HrcT | Virulence | Hrp PAI | Protein | 4e-49 | 50 |
| hrcT | NP_640769.1 | HrcT protein | Virulence | Hrp PAI | Protein | 5e-49 | 50 |
| XC_3004 | YP_244072.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 1e-49 | 49 |
| hrcT | NP_636612.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 1e-49 | 49 |
| hrpB8 | AAB08463.1 | HrpB8 | Virulence | Hrp PAI | Protein | 3e-49 | 49 |
| hrcT | YP_362165.1 | HrcT protein | Virulence | Hrp PAI | Protein | 5e-49 | 49 |
