Gene Information

Name : BC1001_5812 (BC1001_5812)
Accession : YP_004232237.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2504552 - 2505307 bp
Length : 756 bp
Strand : -
Note : KEGG: bgf:BC1003_5849 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCGTTTCTTGACGAAGGTGTCGTTCCCGCGCTCGAGTGCCGGGGACTCAACAAGGCATACGGCGCCGGCCGCATCGT
GCTGGCGGATCTCGACTTTGCGCTCGCGCCCGGAGAATTCGTGGCGATCATGGGCGACTCCGGCGTCGGCAAATCGACGC
TGCTCAACCTGATTGCCGGTCTCGACCGGGCGGACAGCGGAGAAGTGATGATTGGCGGCGCTGCGGTCTCGCGTCTGGAC
GACAATGCGGCAACGCGTTTGCGCCGGCACAAGCTCGGCTTCGTGTTTCAGGCCTTTCACGTGCTGCCTCATCTGACGCT
TGCGCAGAATGTCGCGTTGCCTTTGCTCCTCAATGAATTGCCGGTTGCCGCCGCGCGCGAGATGCTCGCGTCCGTGGGAC
TCGAAGGCCGCGGCGACGATTTCCCGCGCCAATTGTCGGGCGGCGAACTGCAACGCGTTGCCATCGCGCGAACCCTCGTG
CATCGCCCCGCCTTGATTCTCGCCGACGAACCGACGGGCAACCTCGACCCCGATACCGCGCATGGCGTGCTCACGCTGTT
TCGCGCCCAAAGCAAGGCGACCGGGGCGGCCACGATGATGGTCACCCACTCCGAGGCCGCTGCGGCCGTTGCCGACCGCG
TGCTCATTCTCAGCGGAGGCGGCTTGCATCCTGCGCCCGCATTGAAAACGCCGGTGTTTTCACGCGCGCAAGACGGCATG
CAGCCACCCACCCGATCAACCGATGACGCCCGCTGA

Protein sequence : 
MPFLDEGVVPALECRGLNKAYGAGRIVLADLDFALAPGEFVAIMGDSGVGKSTLLNLIAGLDRADSGEVMIGGAAVSRLD
DNAATRLRRHKLGFVFQAFHVLPHLTLAQNVALPLLLNELPVAAAREMLASVGLEGRGDDFPRQLSGGELQRVAIARTLV
HRPALILADEPTGNLDPDTAHGVLTLFRAQSKATGAATMMVTHSEAAAAVADRVLILSGGGLHPAPALKTPVFSRAQDGM
QPPTRSTDDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_5812 YP_004232237.1 ABC transporter-like protein CP001581.1.gene798.p Protein 7e-42 44
BC1001_5812 YP_004232237.1 ABC transporter-like protein NC_008702.1.4606598. Protein 4e-33 43
BC1001_5812 YP_004232237.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-34 42
BC1001_5812 YP_004232237.1 ABC transporter-like protein NC_012469.1.7685735. Protein 3e-34 42