Gene Information

Name : BC1001_5257 (BC1001_5257)
Accession : YP_004231698.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1870944 - 1871636 bp
Length : 693 bp
Strand : -
Note : KEGG: bpy:Bphyt_2190 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing prot

DNA sequence : 
ATGGGGAATAACGACAACGCGGGGAATGCGATGCGTCTGCTTCTCGTAGAAGACGATGAAATGATTGCCGAGCCGGTGCT
CGACTCGATGCGCCGCGAAGGCTATGCGATCGATTGGGCACAGGACGGCCGGGCCGCCGAACTCTCGCTCGGCAACGGCG
TGTACGACCTCGTGCTGCTCGACCTCGGCCTGCCGCGCAAAGACGGCATCGAGGTGCTCAACGCCTATCGCAGTCAAGGC
GGCGAGGCACCCGTCATCATTCTCACCGCGCGCGATGCGGTGGACGATCGCATTCGCGGACTCGATGCCGGCGCGGACGA
CTACCTCGTCAAGCCGTTCGATCTCAACGAACTGGCCGCGCGAGTGCGTGCACTGTCACGTCGTCGCACAGGACAGAAGC
AGCCCGTCTATACGCACGGCGAGCTGACACTCGATCCCGCCGCTCATGAAGTGACGAAAAGCGGCGTGCCGGTGCCGCTC
GTGCCGCGCGAATTCACCTTGCTGCAAGTCCTCATCGAGGCGCCGGCGCGTGTCTTCACCAAGGCGGAACTGGAAGACAA
GCTGTACGGTTGGGGCGAGGAAGTCGGCAGCAATACGATAGAAGTGCATGTGCACAGTTTGCGTCGCAAGATCGGCGCAG
AGCAGATCGTGACGGTGCGCGGCGTCGGGTATCGCCTGAAGAGGTGCGAATGA

Protein sequence : 
MGNNDNAGNAMRLLLVEDDEMIAEPVLDSMRREGYAIDWAQDGRAAELSLGNGVYDLVLLDLGLPRKDGIEVLNAYRSQG
GEAPVIILTARDAVDDRIRGLDAGADDYLVKPFDLNELAARVRALSRRRTGQKQPVYTHGELTLDPAAHEVTKSGVPVPL
VPREFTLLQVLIEAPARVFTKAELEDKLYGWGEEVGSNTIEVHVHSLRRKIGAEQIVTVRGVGYRLKRCE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-32 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_5257 YP_004231698.1 winged helix family two component transcriptional regulator BAC0487 Protein 7e-29 46
BC1001_5257 YP_004231698.1 winged helix family two component transcriptional regulator U82965.2.orf14.gene. Protein 6e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_5257 YP_004231698.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-30 47
BC1001_5257 YP_004231698.1 winged helix family two component transcriptional regulator VFG1390 Protein 8e-27 42