Gene Information

Name : BC1001_5112 (BC1001_5112)
Accession : YP_004231553.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1708705 - 1709454 bp
Length : 750 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_4375 short-chain dehydrogenase/reductase SDR

DNA sequence : 
ATGCTGCTCGAGAACAAGGTGGTTATCGTAACGGGCGCTGCGTCGCCGCGCGGAATCGGCAAGGCGACCGCGAAAGCGCT
GGCCGCACAAGGCGCGCATGTCGTGATCCTCGATCTGCGCGAGGAAGACGCTAAAGCCGCCGCCGCGGATCTCGGCGCCG
GACATCTCGGGCTTGCCTGCGACGTGACGGACAAAGCCGCGTGCGTGAAGGCCGCCAAAGCGGCGCTCGAACGCTACGGC
CGCATCGACGGCCTCGTCAATAACGCGGGCATCACGCAACCGGTGCGTACGCTCGACATCAGCGCCGAGGGCTTCGACGC
GATTGTGGACGTCAATTTGCGCGGCACGCTGTACATGTCGCAAGCCGTATTGCCCGCAATGAAGGAACAGAAAAGCGGCA
GCATCGTGTGCATGTCGTCGGTCTCGGCGCAGCGCGGCGGCGGCATTTTCGGCGGCCCGCACTACAGCGCGGCGAAGGCC
GGCGTGCTCGGTCTCGCACGCGCGATGGCCCGCGAATTCGGCCCCGACAGCATTCGCGTGAACTCGATCACGCCCGGCCT
GATCCAGACCGACATTACCGGCGACAAGCTCACGCCCGAGATGCGCACGGACATCATCAAAGGCATTCCGCTCGGCCGTC
TCGGCGATGCCGCGGATGTCGCGAATGCCTGCCTCTTCCTCGTGAGCGACTTGTCGACGTATCTGACGGGCATCACACTC
GACGTGAACGGCGGCATGCTCATTCATTGA

Protein sequence : 
MLLENKVVIVTGAASPRGIGKATAKALAAQGAHVVILDLREEDAKAAAADLGAGHLGLACDVTDKAACVKAAKAALERYG
RIDGLVNNAGITQPVRTLDISAEGFDAIVDVNLRGTLYMSQAVLPAMKEQKSGSIVCMSSVSAQRGGGIFGGPHYSAAKA
GVLGLARAMAREFGPDSIRVNSITPGLIQTDITGDKLTPEMRTDIIKGIPLGRLGDAADVANACLFLVSDLSTYLTGITL
DVNGGMLIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 7e-68 71
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-68 71
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-68 71
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-68 70
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-67 70