Gene Information

Name : BC1001_4828 (BC1001_4828)
Accession : YP_004231272.1
Strain :
Genome accession: NC_015137
Putative virulence/resistance : Unknown
Product : succinic semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1373254 - 1374693 bp
Length : 1440 bp
Strand : +
Note : KEGG: bgf:BC1003_4668 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase

DNA sequence :
ATGAACCCGTTCTTGCGGACCGGACATTACATCGGCGGCGAGTGGCACGACGGCGCGAGCACGTACCCGGTGCTCAATCC
GGCGACAGGCGAAGTGATCGCGCTAGTCGCAAAAGGCGGCGCGGCCGAGGCGACGCAAGCCATTGCCGCGGCAGAGCGCG
CTTTTCCTGCCTGGCGCTCATTGACCGCGAAGGAGCGCGGCGCGCGCGTCAGACGTTGGGGCGAGTTGATGCTCGAGCAT
CGCGACGCACTGGCCGAACTGTTGACGCGCGAGCAGGGCAAGCCACTCGCCGAGGCGCGCGGCGAAGTCGGCTACGCAGC
GAGCTTCTTCGAATGGTTCGCGGAAGAAGCGAAGCGCGCGTATGGCGACGTGATTCCAAGCCCGAATCCGAACGCGAAGA
TCATCGTGACGCGCGAACCCGTCGGCGTGGTCGCGGCCATCACGCCGTGGAATTTCCCGCTCGCCATGATTACGCGCAAG
GCCGGCCCCGCGCTCGCGGCCGGCTGCACGATGGTGCTCAAGCCATCGGAAGAGACGCCGTTGTCGGCGTTCGCGCTCGC
CGTGCTGGCGGAGAAGGCGGGCATTCCACCGGGCGTGTTCAACATCGTTTCCGGCGATGCCGCCGCGATAGGCGGCGCGC
TGACCGAATCGGAGGTGGTGCGCAAATTGTCGTTCACCGGCTCGACGCGCGTCGGCAAATTGCTTGCGAAACAGTCGGCG
GATACGTTGAAAAAGCTCTCGCTCGAGTTGGGCGGCAACGCGCCGTTCATCGTTTTCGACGACGCCGATCTCGACGCTGC
CGTGCAAGGCGCAATGGCGTCGAAGTTTCGCAACACCGGGCAAACCTGTGTCTGCGTGAATCGCTTCTACGTGCAGGACG
ACATTTACGACGCGTTCACGCAGGCGCTCGCCCAGGCCGCGCGCAAGATGCGCGTGGGCAACGCGCTGCAGGGCGATGTC
GAACAAGGGCCGCTCATCAATCCGGCCGCGTTGGCGAAGGTGCAAGCGCATGTCGCGGACGCGTTGCAGAAGGGCGCCCG
GGCGTTGACCGGCGCGAGGCCGCATGCGCTAGGCGGCACCTTTTATGAACCGACGGTTCTCGTCGATGCAACGAGTTCGA
TGCTGATCGCCCAGGAGGAAACGTTCGGGCCGGTTGCTGCGTGCTTTCGCTTTACCACCGAAGGGGAGGTCGTGGCCGCC
GCAAACGCAACGCCGTTCGGGCTCTCCGCGTATTTCTACACGCGCGATCTGGCGCGCGCGTGGCGCGTCGGCGAAGCGCT
TGAAAGCGGCATGGTGGGCATCAACGAAGGGATTCTGTCCACGGAAGTCGCACCGTTCGGCGGCGTCAAGCAATCAGGCT
TGGGTCGCGAAGGTTCGAAGTATGGACTCGATGAGTACACCGAACTGAAGTACATGCTGATGGGCGGTTTGGGGCGTTGA

Protein sequence :
MNPFLRTGHYIGGEWHDGASTYPVLNPATGEVIALVAKGGAAEATQAIAAAERAFPAWRSLTAKERGARVRRWGELMLEH
RDALAELLTREQGKPLAEARGEVGYAASFFEWFAEEAKRAYGDVIPSPNPNAKIIVTREPVGVVAAITPWNFPLAMITRK
AGPALAAGCTMVLKPSEETPLSAFALAVLAEKAGIPPGVFNIVSGDAAAIGGALTESEVVRKLSFTGSTRVGKLLAKQSA
DTLKKLSLELGGNAPFIVFDDADLDAAVQGAMASKFRNTGQTCVCVNRFYVQDDIYDAFTQALAQAARKMRVGNALQGDV
EQGPLINPAALAKVQAHVADALQKGARALTGARPHALGGTFYEPTVLVDATSSMLIAQEETFGPVAACFRFTTEGEVVAA
ANATPFGLSAYFYTRDLARAWRVGEALESGMVGINEGILSTEVAPFGGVKQSGLGREGSKYGLDEYTELKYMLMGGLGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 5e-141 66
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 5e-71 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-53 41