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Name : BC1001_3718 (BC1001_3718) Accession : YP_004230190.1 Strain : Genome accession: NC_015137 Putative virulence/resistance : Unknown Product : proprionate catabolism activator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 135188 - 137173 bp Length : 1986 bp Strand : - Note : TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; KEGG: bgf:BC1003_3764 proprionate catabolism DNA sequence : ATGTCCACTTTCACGCCGCCGTTCGTCAGTACCGATTCGGGCCGCCCGGGCGTCGCGCTTGTCAGTATCAGCCGCCTGCA GTCGCTTTGCGAGACGATTGCACCGCGCTACGCCGAGCACGCCAGATTTTTCTCGATTCGCGAAGGCTACGGCGCGGCGG TGACCGCGCTGCAAAGCTACGTGGATGCCGGTTCCGTCGACGTCGTGCTCGCCGCCGGCTCGAACGGCGCCTATTTGCGC GACAACCTGAGCGTGCCGGTGGTCATGGTCAAGGTGAACGGCTTCGACGTGTTGAGCGCGATCACCCACGCCACCACCAC ATGGCCTGGCGCGCCCATCGGCCTCGTGCTGCACGAAACGATCTCGCACGAACTCGCCGATCTGGGCGGCTTGCTGACCG TGCGCCTCACGCAGCGCGTGTACCGCTCCGTCGACGAGGTCAAGACCGCCGTCAACAACCTCGCCGCCGAAGGTTGCCGG GTCATTATCGGACCGGGCATGGCCTGCGACCTCGCGCAGCAGGCGGGACTCGCGAGCGTGTTTCTGTACTCGCTCGGCGC GGTGGAGGAAGCCTTCGAGCGTTCGGTCGAACTCGCGCGCGTGAGCCGGCAGAAGGAGTCCAAGCGCGTGCGTCTGAACA CTATCGTCGCGCATTTGCGCGACGGCGTGGCCGCTTTCGACGACGCCGGCCAGCTCGAAGCCGTCAATCCCGCGATGCTC GAGCTGCTCGGCCTCGAAGGCGGGCGCGACATGCCGGCCCAGCTCGCGCGACGGGTCGGCCCGTGGCTGCGCGACGCGCT CGAACGCGGCGGTGCCGTCGACGAGCGCATCGAGCAGATCGGCCAACGCTCGCTCATCGTCAATTGCGTGCCGATTGTGG AGCAGGGCGCGCGCTCGGGCGCGGTCGTGACGGTGCAGGACGCGCTCGTCGCGCAGCGGATCGACCGGTCGCTGCGCACG AGCCAGCGGCCGAAGCATCTGGTCGCCCGGCATCGGCTGGAAGATCTGGTCGGCGCATCGGCGGCGCTCGAACGCGTGCG GCGGCTCGCGCATGCGGGCGCGGCGCACGACGCGACTGTCCTCTTGAGCGGCGAGAGCGGCACCGGCAAGGAGCTGGTCG CTCAGGGCATCCACAACGCGAGCCGACGGCGCGGCAATCCGTTTGTCGCCTTCAATTGCGCGGCGCTGCCGGAAGGTTTG ATCGAAAGCGAGCTGTTCGGCCATGAAGAAGGCGCGTTCACCGGCGCGCGGCGGGGCGGCAAGCCGGGACTTTTCGAGAT CGCCCACACAGGGACCATTTTTCTCGACGAAATCGGCGAGATGCCGGCCGCGCTGCAAAGCCGGCTGCTGCGCGTGCTGC AGGAGCGGGAGGTCATGAAGCTGGGTTCGGGCCGGGCCACGCCCGTCGACGTGCGCGTGATCGCCGCCACGCATCGCGAC CTGCCTGCGCTCGTCGGCGAGGGCGCGTTTCGCGCGGACCTGTATTTTCGTCTGAATCTGCTTCAGATAGAATTGCCGCC GCTGCGCGAGCGACGCGCCGACGTGCTTCCGCTGGCCCGGCACTTGTTAAACCGCACTGCGCTCCAATATGGATTATCCG AGGCGGCGATCGGGCGGGTGCTGAAGTTTCTGGCGCCTTTGTTCGAGCGCTATGCGTGGCCCGGGAATGTGCGCGAACTC GACAATCTGCTGGCGCGCGCGGCCATTTATCTGGGCGCCACGACAGGCGAATCTGACGGCGACATCGGCCCGGATCTGCT GGCGCTGTTTCCCGAATTTGAGCGGATGCAGCGGGAAGACGGGCACGGCGCGCCGTCGACGGCTGCCGCTGCTGCCACGT TGGCCGCGCCCCGTCTCACGCCGAGCCGCGACGAGGTCGTGAGGGCGCTCGAACAGTGCGGCGGCAACCGCGCCGCGGCA AGCCGGGCGCTCGGCATTGGCCGGACGACGCTGTGGCGGCTTCTGAAGGCCGACGAAACGCGATAG Protein sequence : MSTFTPPFVSTDSGRPGVALVSISRLQSLCETIAPRYAEHARFFSIREGYGAAVTALQSYVDAGSVDVVLAAGSNGAYLR DNLSVPVVMVKVNGFDVLSAITHATTTWPGAPIGLVLHETISHELADLGGLLTVRLTQRVYRSVDEVKTAVNNLAAEGCR VIIGPGMACDLAQQAGLASVFLYSLGAVEEAFERSVELARVSRQKESKRVRLNTIVAHLRDGVAAFDDAGQLEAVNPAML ELLGLEGGRDMPAQLARRVGPWLRDALERGGAVDERIEQIGQRSLIVNCVPIVEQGARSGAVVTVQDALVAQRIDRSLRT SQRPKHLVARHRLEDLVGASAALERVRRLAHAGAAHDATVLLSGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGL IESELFGHEEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGRATPVDVRVIAATHRD LPALVGEGAFRADLYFRLNLLQIELPPLRERRADVLPLARHLLNRTALQYGLSEAAIGRVLKFLAPLFERYAWPGNVREL DNLLARAAIYLGATTGESDGDIGPDLLALFPEFERMQREDGHGAPSTAAAAATLAAPRLTPSRDEVVRALEQCGGNRAAA SRALGIGRTTLWRLLKADETR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 5e-102 | 41 |
