|
Name : BC1001_0988 (BC1001_0988) Accession : YP_004227499.1 Strain : Genome accession: NC_015136 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1107959 - 1109497 bp Length : 1539 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: bcm:Bcenmc03_1110 integrase catalytic region DNA sequence : ATGTATTCATACGAAGACCGCGTTCGCGCGGTCGAGCTGTACCTGAAGCTCGGGAAGCGCGTCAAGGCAACAATCCGCCA GTTGGGTTACCCGACGAAGAATTCTCTCAAGGCGTGGTGTGCGGAATTCGAGAGCAGTGGCGATCTGCAGAAAGAATATG TTCGTGCCAAGCCGAAGTACTCAGAGGAACAGAAGAACGTGGCACTCGAGCATTACGTCAATCACGGGCGGTGCGTCAGC TTTACCCTCCGGGCATTAGGCTATCCCTGTCGCCAGATACTGACGGCGTGGGTTCGCGAGCGCTATCCTGAGGCCAGGAC ATACGTGGTTGGCAAGCGAGGTCGACCGGCCGCTTCATTGCCGTCCAGGCAAGCCGCAGTGTACGAACTGTGCACACGGC AAGGAAGTGCGGAGGCGGTGGCGCGAAAGCTGGACGTCGACAGGGTGACCCTGTACAACTGGAAGAACCAGTTACTCGGG CGAGAGGCCCCTGCATCCATGAAGCGCGACAAGAGATCAACCGCAGAGACGGATCGGGACGAACTGGAGCGGCAGGTCGA AGAGCTCCGGCGCGATATCCGCAATCTGCAGCTTGAACACGACCTGTTGAAGAAGGCGAATGAAATCATAAAAAAAGACC TGGGCGTCGACCTGCCACTCCTGAGCAACCGGGAAAAGACGACGCTGATTGACGCCCTGAGAGAAGAATACAGTTTGGCT AAGCTGCTTGCGCGGTTGGAGCTAGCGCGCAGCTCCTATTTCTACCATCGGTCGTCCATACGGCTTGCCGACAAATATGC GGACGTCCGTTGTACCGTTGCTGAGATCTTTGAGGACAATCACCGATCCTACGGCTATCGTCGGGTGCATGCGGCGCTCA GCCGACAACGGGTGTTTCTATCGGAGAAAGTTGTGCGTCGCCTGATGAAACAAGGCGGCCTCTACGCGGCAAGGCCCAGG CGGCGCCGATACCGTTCTTATATCGGCGAAATCAGCCCTGCCCCGGAGAACATCATCAATCGCGATTTCCACGCTGACGC CCCCAACGAGAAGTGGGTGACGGACATCTCCGAATTCCAGATTCCCGCGGGGAAGGTATATCTATCGCCCATGATCGACT GCTTCGACGGCATGGTCGTCAGCTGGACGATTGGTACCAGCCCCGACGCAGAGCTCGTAAATACCATGCTGGATGCGGCC ATCGAGACCGTGACCGAAAACGATGAGACGCCAATCGTACATTCGGATCGAGGTGGCCATTACCGTTGGCCGGGCTGGCT GTCGCGGGTTGCAAAGGCTAATCTGGTCCGGTCCATGTCGCGTAAAGCCTGTTCACCTGACAACGCAGCCTGTGAGGGAT TCTTCGGCAGGCTGAAGACTGAGATGTTCTATCCAGGAGACTGGCGTTCGACGACCATCGCGGAGTTCGTTGAGGTATTG AACGCCTACATTCGCTGGTACAACGAGAAACGGATCAAGGGCTCGCTTGGCTATCTCAGCCCCATCGAGTACCGTGAACG CCTCGGGCTAACGACGTAA Protein sequence : MYSYEDRVRAVELYLKLGKRVKATIRQLGYPTKNSLKAWCAEFESSGDLQKEYVRAKPKYSEEQKNVALEHYVNHGRCVS FTLRALGYPCRQILTAWVRERYPEARTYVVGKRGRPAASLPSRQAAVYELCTRQGSAEAVARKLDVDRVTLYNWKNQLLG REAPASMKRDKRSTAETDRDELERQVEELRRDIRNLQLEHDLLKKANEIIKKDLGVDLPLLSNREKTTLIDALREEYSLA KLLARLELARSSYFYHRSSIRLADKYADVRCTVAEIFEDNHRSYGYRRVHAALSRQRVFLSEKVVRRLMKQGGLYAARPR RRRYRSYIGEISPAPENIINRDFHADAPNEKWVTDISEFQIPAGKVYLSPMIDCFDGMVVSWTIGTSPDAELVNTMLDAA IETVTENDETPIVHSDRGGHYRWPGWLSRVAKANLVRSMSRKACSPDNAACEGFFGRLKTEMFYPGDWRSTTIAEFVEVL NAYIRWYNEKRIKGSLGYLSPIEYRERLGLTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-28 | YP_001800886.1 | transposase for insertion sequence | Not tested | Not named | Protein | 9e-59 | 44 |
| DIP0752 | NP_939125.1 | IS element transposase | Not tested | Not named | Protein | 1e-62 | 41 |
