Gene Information

Name : BC1001_0546 (BC1001_0546)
Accession : YP_004227068.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : transposase IS116/IS110/IS902 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 612405 - 613610 bp
Length : 1206 bp
Strand : -
Note : PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bxe:Bxe_B0156 transposase

DNA sequence :
ATGCAAGAAAACCAACAACATAGTTCCGTCGATGTATTCGTTGGCGTCGATGTCGGCAAAGGCCACCATCACGCCGTCGC
TCTCGATCGCAACGGAAAGCGCCTGTACAACAAAGCGCTGCCCAACGATGAGGCCAAACTGCGCGCGCTCATTACCGAGC
TCAAGGCGCACGGCCAGCTTCTGTTCGTCGTCGATCAGCCCGCCACCATTGGCGCGCTGCCCGTGGCAGTCGCCCGTGAT
GAAGGTGTCCTCGTCGCCTATCTGCCGGGTCTGGCCATGCGCCGCATCGCCGATCTGCATGCAGGCGAAGCCAAGACCGA
TGCCCGCGATGCCGCGATCATTGCCGAAGCCGCGCGCTCGATGCCGCATACGCTGCGCTCGCTTCGATTGGCCGACGAGC
AGCTCGCCGAACTCACCATGCTGTGCGGCTTCGATGACGATCTCGCCGCCCAGATCACTCAAACCAGCAACCGCATTCGC
GGCCTGCTTACCCAGATTCATCCGGCCCTTGAGCGTGTTCTCGGACCGCGCCTCGACCATCCGGCGGTGCTCGATTTGCT
TGAGCGCTATCCGTCGCCCGCCGCGCTTGCCGCCACTAGCGAGAAGACGCTCGCTAACCGCCTGACCAAGCTCGCGCCAC
GCATGGGCAAGAGCCTGGCGGCCGAAATCGTTCAGGCTCTGAGCGAACAAGCCGTGATCGTGCCCGGCACGCAAGCCGCC
ACCATCGTCATGCCCCGCTTGGCCCAGCAACTTGCCGCCTTGCGCAAGCAGCGCGACGAAATCGCCGCCGAAGTTGAACG
ACTGGTGCTTGCGCACCCTCTTTGGCCGGTCCTGACCAGCATGCCGGGAGTCGGCGTCAGGACCGCCGCCAGACTCCTCA
CTGAAGTCGCTCACAAAGCCTTCGCTTCAGCAGCGCATCTCGCCGCCTACGCTGGCCTCGCCCCGGTCACCCGACGCTCG
GGCTCGTCCATCCGTGGAGAACACCCATCCAGACGGGGCAACAAGGTGCTCAAGAGAGCGCTCTTCCTCTCGGCCTTTGC
CGCCCTGCGGGACCCGGTCTCAAGGGACTACTACGCTCGCAAGGTCCAGCAGGGCAAGCGCCACAATCAGGCGCTCATTG
CCCTTGCCAGACGACGCTGCGACGTACTGTTCGCAATGCTCCGCGACGGCACCTTCTATCAACCGAAATCCGCCCCTAAC
GCTTGA

Protein sequence :
MQENQQHSSVDVFVGVDVGKGHHHAVALDRNGKRLYNKALPNDEAKLRALITELKAHGQLLFVVDQPATIGALPVAVARD
EGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLCGFDDDLAAQITQTSNRIR
GLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALAATSEKTLANRLTKLAPRMGKSLAAEIVQALSEQAVIVPGTQAA
TIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPLWPVLTSMPGVGVRTAARLLTEVAHKAFASAAHLAAYAGLAPVTRRS
GSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRDYYARKVQQGKRHNQALIALARRRCDVLFAMLRDGTFYQPKSAPN
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 4e-126 82
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_0546 YP_004227068.1 transposase IS116/IS110/IS902 family protein VFG1494 Protein 2e-126 82