|
Name : BC1001_0422 (BC1001_0422) Accession : YP_004226944.1 Strain : Genome accession: NC_015136 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 463639 - 465834 bp Length : 2196 bp Strand : + Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: bgf:BC1003_0436 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase do DNA sequence : ATGCCTTTGTCCGACCGCCGATCGCCTTCCGCAGATGAACTGAGCGCCGAACCGGCAGCCCGCGTCGCGCGAGACGACGG GTTGGGCAAGCCTGCGGCGAAATCCGCGGCAAATTCCGCAGCCAAAGCGGCCTCCACCAAAACCGCCGACAAACTCGCCA AGCTCGGCCTCACGCGCGACATCGACCTCGTGCTGCATCTGCCGATGCGCTACGAGGACGAAACCTCGCTCACGCCGATC GGTCATCTGCTGCCCGGCGGCATCGCGCAAACGGAAGGCGTGGTGTTCGACAACGAGATCGCCTATCGTCCGCGCCGTCA GTTGCTCGTCAAATTGCGCGACGACGCCGGCGACGAACTCGTGCTGCGCTTTCTGAACTTCTACGGTTCGCAGGTCAAGC AGATGGCCATCGGCGCGCGGCTGCGCGTGCGCGGCGACGTGCGAGGCGGCTTCTTCGGCATGGAGATGGTGCATCCGGCA GTGCGCGTGGTCGACGAGGACACGCCGCTGCCGCAAGCGCTCACGCCGGTTTATCCGAGCACCGCGGGCGTGACACAGGC CTATTTGCGCAAGGCAATCGACAACGCGTTGTCGCGCACGTCGCTGCCGGAGCTGTTGCCCGAGGCCGTCGCACGCGAAT GGCTGCAGCCGCTTGGCGTGCCCTCGCTGATGGACGCGGTGCGCACGCTGCATCATCCGGGCGCGCAGTCGGACGAGACC GCGTTGATCGACGGCACGCATCCGGCGTGGGTGCGCATCAAGTTCGAGGAACTGCTCGCGCAGCAGATGTCGCTCAAGCG CGCGCACGAGGAGCGCCGCACGCGCGCCGCGCCGGCCATGCCGCGTCGCAAGCTGGGCGACGAAGCGGCGCTCGTCGCGC GTCTGCTGAAGGCGCTGCCGTTTTCGCTGACGAAGGCGCAGGAGCGCGTGGGCGGCGAGATCGCGCTCGATTTGACCCAG CCGCATCCGATGCAGCGGCTCCTGCAGGGCGACGTCGGCAGCGGCAAGACCATTGTGGCGGCGCTGGCTGCCGCGCAGGC GATCGACGCCGGCTACCAGGCCGCGCTCATGGCGCCCACCGAAATTCTCGCCGAGCAGCACGCGCGCAAGCTGCGCGGCT GGCTGGAGCCGCTCGGCGTGAGTGTCGCGTGGCTCGCGGGCAGCCTGAAGGCGAAGGAAAAGCGCGCGGCTATCGAAGCC GCCGCGCTCGGCACCGCGCAACTCGTGATCGGCACGCACGCGATCATCCAGGACACGGTGGAGTTCGCCCGTCTCGGGCT TGTGATCGTCGACGAACAGCACCGCTTCGGCGTCGCGCAACGTCTCGCGCTGCGCGCCAAAGCACTGAACGCCGCTGACG GCGCGCGCGATTTCCAGCCGCATCAGCTGATGATGTCCGCCACGCCCATTCCGCGCACGCTCGCCATGACGTATTACGCG GACCTCGACGTCTCGACGATCGACGAATTGCCGCCCGGGCGCACGCCCATTCTCACCAAGCTCGTGTCCGACGCGCGCCG CGAGGAAGTGATCGGCCGCGTGCGCGAAGCGGCGCTGACCGGGCGGCAGGTCTATTGGGTGTGTCCGCTGATCGAGGAAA GCGAGACGCTGCAACTGCAGACCGCGGTCGAGACCTATGAAACGCTGGTCGCGGCTTTGCCGGAATTGAAGGTCGGGCTC GTGCACGGCCGTCTCGCGCCGGCCGAGAAGGCCGCGGTGATGGATGCGTTCACGCGCAACGAGGTGCAGCTGCTCGTCGC GACGACGGTGATCGAAGTGGGCGTCGACGTGCCGAATGCGTCGCTGATGGTGATCGAGCACGCCGAGCGCTTCGGCCTCG CGCAACTGCACCAGTTGCGCGGGCGGGTGGGGCGCGGCAGCGCGGCGTCGGTCTGCGTGCTGCTCTACACCGGACCGCTT TCGATGACCGCGCGCGCCCGCCTGCAAACCATGCGCGAGACGACCGACGGCTTCGAAATCGCGCGCCGCGATCTGGAGAT ACGCGGTCCCGGCGAGTTTCTCGGCGCACGGCAGTCCGGCGCGGCGATGCTCCGGTTCGCCGATCTGCAAAACGATCAAT GGCTGATCGAGCCCGCGCGCGAAGCCGCCGCGGCGCTGCTAGAGAAGCATCCTGAGGTGGTCACGCAGCATCTGGCGCGC TGGCTCGGCGCGCGCGAACATTACCTGAAGGCCTGA Protein sequence : MPLSDRRSPSADELSAEPAARVARDDGLGKPAAKSAANSAAKAASTKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPI GHLLPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLRFLNFYGSQVKQMAIGARLRVRGDVRGGFFGMEMVHPA VRVVDEDTPLPQALTPVYPSTAGVTQAYLRKAIDNALSRTSLPELLPEAVAREWLQPLGVPSLMDAVRTLHHPGAQSDET ALIDGTHPAWVRIKFEELLAQQMSLKRAHEERRTRAAPAMPRRKLGDEAALVARLLKALPFSLTKAQERVGGEIALDLTQ PHPMQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLAGSLKAKEKRAAIEA AALGTAQLVIGTHAIIQDTVEFARLGLVIVDEQHRFGVAQRLALRAKALNAADGARDFQPHQLMMSATPIPRTLAMTYYA DLDVSTIDELPPGRTPILTKLVSDARREEVIGRVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLVAALPELKVGL VHGRLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGSAASVCVLLYTGPL SMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLQNDQWLIEPAREAAAALLEKHPEVVTQHLAR WLGAREHYLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 5e-96 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1001_0422 | YP_004226944.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-132 | 56 |
