Gene Information

Name : BC1001_3374 (BC1001_3374)
Accession : YP_004229848.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 3818486 - 3820183 bp
Length : 1698 bp
Strand : +
Note : TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bgf:BC1003_3332 flagellar protein export ATPase FliI; SMART: ATPase AAA

DNA sequence : 
ATGGTGAAGCCGACGCTCGAGGAAATCCGCGCAAGCGACCTCACGCCGCTCGAACGCGAGCTGGCGCTGGCCTCGTTCGG
CGCCCAGGCGCTAGCAGACACGCCGTTCGCGGATGGTCTTTCGGCCGGCGAATTGCTGGCCGGGCCGGCGGCGTCTGCCG
CGGGCGGTGCGGCTCGGAGTCACGTGCATCCGCTGACCGGCTCGGCGGCGAGCCGCGAGTCGGCGCCGGCCGCTCACGTC
GACGCAAATGCAGCGGCTGGAGCCGGGGCCGCGCGCACCGCCGCCAAGGCAGCGGCACCTTACGATCCCGCGCTCGACAG
CAATCCGCACATGCAAGCCTGGCGCGGCCAGCTCGACGCGCTGCGCGCCCGCAATGCGCTCGCCAAGCCGATGCGCGCCT
GCGGACGCCTGACGCGCGCCGCCGGTCTCGTGCTCGAAGCCGTCGGCCTGCGTCTTTCCGTGGGCGCCGAAGTGATGATC
GAACTGCCGCCCGGCAGTTCGCTGCCGATGGCCGAAGCCGAAGTGGTCGGCTTTTCCGGCGACAAACTGTTTCTGATGCC
GACCACCGAAGTGATCGGCTTGCTGCCCGGCGCGCGCGTCTTTCCGCTGGAAAGCGCGCCGATCGCGGACCCCATGGCGG
GCGCGAAGCGCCTGCCGGTCGGCTGGGAGCTGCTCGGCCGCGTGCTCGACGCGTCCGGCCGTCCGCTGGACGGTCTCGGC
CCGCTCGGCGCGCAGACCGATGCGCCGCTTTCCGCGCCGGTCATCAATCCGCTGAACCGCGAGCCGATTCACAAGGTGCT
CGACGTCGGCGTGCGCGCGATCAATGCCCTCCTCACGGTGGGACGCGGGCAGCGCATGGGCCTCTTCGCCGGCTCGGGCG
TCGGTAAATCCGTGCTGCTCGGCACGATGGCGCGCTACACCAGCGCCGAAGTGATCGTGATCGGGCTGATCGGCGAACGC
GGCCGCGAAGTGAAGGAGTTCATCGAACAGATTCTCGGCGAGGAAGGTCTCGCGCGCTCGGTGGTGATCGCCGCGCCGGC
CGACGTGTCGCCGCTTTTGCGGATGCAGGCGGCGGCCTACTCGACCTCGCTCGCCGAATATTTCCGCGACCAGGGCAAGC
ACGTGCTGCTGCTGATGGATTCGCTGACCCGCTACGCGATGGCGCAGCGCGAGATCGCGCTCGCCGTGGGCGAGCCGCCC
GCCACCAAGGGTTACCCGCCTTCGGTGTTCGCGAAGCTGCCGGCGCTCGTGGAGCGGACCGGCAACGGACCGGCGGGCGG
CGGCTCGATCACCGCGTTCTACACGGTCTTGACAGAAGGCGACGACCAGCAGGACCCGATCGCCGACTCCGCGCGGGCGA
TTCTCGACGGCCATATCGTGCTGTCGCGCTCGCTCGCAGAAGCCGGCCACTATCCGGCGATCGACATCGAAGCGTCGATT
AGCCGGGCAATGACCGCGCTGATCGACGATAACCATCTGGACAAAACGCGTATGTTCAAGCAGATGCTGTCGCGCTATCA
GCGCAACCGCGATCTGATCAACGTGGGCGCGTATTCGAGCGGGCGCGACGCGCTGCTCGACCGCGCCATCGCGCTGTATC
CGCGGATGGAAGCCTTTCTGCAACAAGGCTTTCGCGAGTGCGCGAACTTTGAACCGAGTATCGAGATGCTGGACGCGCTG
TTTGCCCAAGGAGGCTGA

Protein sequence : 
MVKPTLEEIRASDLTPLERELALASFGAQALADTPFADGLSAGELLAGPAASAAGGAARSHVHPLTGSAASRESAPAAHV
DANAAAGAGAARTAAKAAAPYDPALDSNPHMQAWRGQLDALRARNALAKPMRACGRLTRAAGLVLEAVGLRLSVGAEVMI
ELPPGSSLPMAEAEVVGFSGDKLFLMPTTEVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVLDASGRPLDGLG
PLGAQTDAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGER
GREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPP
ATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAGHYPAIDIEASI
SRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRMEAFLQQGFRECANFEPSIEMLDAL
FAQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-82 48
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-82 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-81 48
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-82 48
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-81 48
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-81 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-80 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-80 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 8e-78 46
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-73 44
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-71 44
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-71 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-66 43
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-61 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-61 43
escN AAK26715.1 EscN Virulence LEE Protein 5e-73 42
escN AAL57542.1 EscN Virulence LEE Protein 5e-73 42
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-73 42
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-73 42
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-73 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-67 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-67 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-66 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-67 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-67 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-69 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-67 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 6e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG2499 Protein 0.0 86
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG2331 Protein 6e-145 70
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG1254 Protein 4e-126 64
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-83 46
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-80 46
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG0048 Protein 3e-80 46
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-78 45
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG1008 Protein 2e-64 41
BC1001_3374 YP_004229848.1 flagellar protein export ATPase FliI VFG2459 Protein 1e-62 41