Gene Information

Name : BC1001_0030 (BC1001_0030)
Accession : YP_004226556.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 28637 - 30157 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: bgf:BC1003_0049 aldehyde dehydrogenase

DNA sequence :
ATGAATCACGCGGAGATGCAGTTTCTGACGACCGAATTCCCGTACAAAAAGCAGTATGCGAACTTTATCGGTGGCGAATG
GGTGAAGCCGGTGGGTGGCGAGTACTTCGACAATGTGTCGCCCATCACGGGCGAGCCATTCACTTCCATTCCGCGCTCCC
GTGAGGCCGACGTCGAACTCGCGCTGGATGCCGCGCACCGCGCGAAAGCCGCATGGGGCAAAACCTCGACGACGGATCGC
GCGAACATTCTGAACCGCATTGCCGACCGCATGGAAGCGAACCTGCAGCGGCTCGCGGTCGCTGAAACGATCGATAACGG
CAAGCCGCTGCGCGAAACGATGGCCGCCGACATTCCGCTTGCCATCGACCACTTCCGCTATTTCGCCGGCGCCGTGCGCG
CGCAGGAAGGCTCGATCTCCGAAATCGACGACGACACGGTGGCCTATCACTTTCACGAGCCACTCGGCGTGGTCGGTCAG
ATCATTCCGTGGAATTTCCCGATTCTCATGGCGGTGTGGAAACTCGCCCCCGCGCTCGCGGCCGGCAATTGCGTCGTGCT
CAAACCCGCCGAGCAAACGCCCGCATCGATTCTCGTCCTCGTCGAACTGATTCAGGACCTGCTGCCCGCCGGCGTGCTGA
ATGTGGTCAACGGTTTCGGTCTGGAAGCAGGCAAACCGCTCGCCTCCAGCAAGCGCATCGCAAAGATCGCGTTCACCGGC
GAAACCACCACGGGTCGCCTGATCATGCAGTACGCGAGCCAGAACATCATTCCGGTCACGCTCGAACTGGGCGGCAAGAG
CCCGAACATCTTTTTCGCCGACGTCATGAGTCAGGACGACAGCTACTTCGACAAAGCGCTCGAAGGCTTCGCGATGTTCG
CGTTGAATCAGGGCGAAGTGTGCACGTGCCCTTCGCGCGTATTGATCGATGAAAAGATTTACGACCGCTTTATGGAACGC
GCGTTGAAACGCGTCGCGGCGATCACGCAGGGTCATCCGCTGGATACGAAGACGATGATCGGCGCGCAGGCTTCGCAAGA
GCAGTTGGAGAAGATCCTGTCGTATGTGGATCTCGGCAAACAGGAAGGCGCCGAATGCCTGATCGGCGGCGAGCGCAACG
TGCTTGGCGGCGAACTGAGCAAGGGCTATTACGTGAAGCCCACTGTGTTCCGCGGCAACAACAAGATGCGCATCTTCCAG
GAAGAGATCTTCGGGCCGGTGGTGTCGGTCACGACGTTCAAGACCGAAGACGAAGCGCTCGAAATCGCCAACGACACGCT
GTACGGTCTCGGCGCGGGCGTCTGGACACGCGACGGCACGCGCGCCTATCGCTTCGGCCGGCAGATTCAGGCAGGCCGCG
TGTGGACCAATTGCTATCACGCATATCCGGCGCACGCGGCGTTTGGCGGCTACAAGCAATCGGGCATTGGCCGCGAAAAT
CACAAGATGATGCTCGACCATTATCAGCAGACCAAGAACCTGCTCGTGAGCTATAGCGAGAAACCGCTCGGGTTCTTCTA
A

Protein sequence :
MNHAEMQFLTTEFPYKKQYANFIGGEWVKPVGGEYFDNVSPITGEPFTSIPRSREADVELALDAAHRAKAAWGKTSTTDR
ANILNRIADRMEANLQRLAVAETIDNGKPLRETMAADIPLAIDHFRYFAGAVRAQEGSISEIDDDTVAYHFHEPLGVVGQ
IIPWNFPILMAVWKLAPALAAGNCVVLKPAEQTPASILVLVELIQDLLPAGVLNVVNGFGLEAGKPLASSKRIAKIAFTG
ETTTGRLIMQYASQNIIPVTLELGGKSPNIFFADVMSQDDSYFDKALEGFAMFALNQGEVCTCPSRVLIDEKIYDRFMER
ALKRVAAITQGHPLDTKTMIGAQASQEQLEKILSYVDLGKQEGAECLIGGERNVLGGELSKGYYVKPTVFRGNNKMRIFQ
EEIFGPVVSVTTFKTEDEALEIANDTLYGLGAGVWTRDGTRAYRFGRQIQAGRVWTNCYHAYPAHAAFGGYKQSGIGREN
HKMMLDHYQQTKNLLVSYSEKPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-147 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-153 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_0030 YP_004226556.1 aldehyde dehydrogenase VFG0082 Protein 1e-147 64