Gene Information

Name : BC1001_2861 (BC1001_2861)
Accession : YP_004229335.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3259865 - 3260809 bp
Length : 945 bp
Strand : -
Note : KEGG: bgf:BC1003_2798 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGAGCGATACCCTGGTTGACGACGCAAGCGCGCAGTTATCGCACTCGCCCTTATTCACGGCGAGCTCCGCTTCAATCGA
CGCATTCTGCGACGCGCTGTGGCTCGAACACGGCCTGTCGCGCAACACGCTCGACGCGTATCGGCGCGACCTGCGCCTCT
TCAGCGAATGGCTCGCGCAAACGCGCAGCGCCTCGCTCGACACGGCCAGCGAGGCCGATCTGAACGCCTACAGCGCGGCG
CGTCAGAAAGATAAATCGACGTCGGCCAACCGGCGGCTCTCCGTGTTTCGCCGCTATTACGGCTGGGCCGTGCGCGAGCA
TCGCGCGAAAGTGGACCCGACGCTGCGCATCCGTTCGGCGAAGCAGCCGCCGCGCTTTCCGTCCACGCTCAGCGAGGCGC
AGGTCGAGGCGCTGCTCGGCGCGCCCGACATCGAGACGCCCCTGGGTCTGCGCGATCGCACCATGCTCGAACTGATGTAC
GCGAGCGGTTTGCGCGTCACTGAACTCGTCACGCTGAAGACCGTGGAAGTGGGCCTGAACGAAGGCGTGGTCCGCGTGAT
GGGCAAGGGCTCGAAAGAGCGGCTCATCCCGTTCGGCGAAGAGGCGCACGGCTGGATCGAGCGTTACCTGCGCGACGCGC
GGCCCGCGCTGCTCGGCGCGCGCGCGGCCGATGCGCTGTTCGTGACGAACCGCGCCGAGGGCATGACGCGCCAGCAGTTC
TGGAACATCATCAAGCGACACGCGGCGGCCGCGGGCGTGCATGCGCCGCTGTCGCCGCATACATTGCGGCATGCGTTCGC
GACGCATCTGCTCAATCATGGCGCCGATCTGCGCGTGGTCCAGCTGCTGCTCGGACATACCGACATTTCGACCACGCAAA
TCTATACACACGTGGCGCGCGAACGGCTGAAGTCGCTGCATGCCATGCATCATCCGCGGGGCTGA

Protein sequence :
MSDTLVDDASAQLSHSPLFTASSASIDAFCDALWLEHGLSRNTLDAYRRDLRLFSEWLAQTRSASLDTASEADLNAYSAA
RQKDKSTSANRRLSVFRRYYGWAVREHRAKVDPTLRIRSAKQPPRFPSTLSEAQVEALLGAPDIETPLGLRDRTMLELMY
ASGLRVTELVTLKTVEVGLNEGVVRVMGKGSKERLIPFGEEAHGWIERYLRDARPALLGARAADALFVTNRAEGMTRQQF
WNIIKRHAAAAGVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLKSLHAMHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-52 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-52 55