Gene Information

Name : BC1001_2720 (BC1001_2720)
Accession : YP_004229196.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 3099365 - 3100522 bp
Length : 1158 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bgf:BC1003_2688 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGTTCTCGCAAACCGACTTCGTCCACATGGAACGCGCGCTCGCGCTTGCGAAGCGCGGCATGTACACCACCGACCCCAA
TCCGCGCGTGGGTTGCGTGATCGTCCAGAACGGCGAAGTGATCGGCGAAGGGTTCACGCAGCCGGCCGGCCAGGACCATG
CCGAGATCCGCGCAATGAAAGACGCGCGCTCGCGCGGTCACGATCTGCGCGGCGCAACCGTCTACGTCACACTCGAACCG
TGCAGCCATTTCGGCCGCACGCCGCCGTGCGCGAACGCGCTGATCGAAGCGCAGGTCGCGCGCGTGGTTGCCGCCATGGA
AGACCCGAACCCGCAGGTGTCCGGCCGCGGCCTCGCCATGTTGCGCGACGCCGGCATCGAAGTGCGCTGCGGGCTGCTCG
CCAATGAAGCGCAGGAGTTGAACATCGGCTTCGTGTCGCGCATGACGCGCGGCCGGCCATGGGTGCGCATGAAAGTGGCC
GCGTCGCTCGATGGTCGCACCGGCTTGCCTTCGGGCGTCAGCCAGTGGATCACCGGCGAAGCGGCGCGTGCGGACGGCCA
TGCCTGGCGTGCCCGCGCGTCGGCGATTCTGACCGGCATCGGCACCGTCAGGGAAGACGATCCGCGCATGACCGTGCGCG
CCGTCGACACGCCGCGCCAGCCGCAACGCGTGCTGATCGACAGCCAGCTGGAAGTTTCTCCGCAGGCGCAGATTCTCGCC
GGCGCACCCACGCTGATTTTCTGCGGCAATCTGGACGAGCGGCACAGCGAGCGCGTGCAGGCGTTGCGCAATCGCGGCGC
GGAGATCGTCGAAATGGCCAACGCAGCGGGCAAGGTCGACCTGCCCGGCATGTTGAAGGTGCTTGGCGAGCGCCAGGTGA
ACGAGCTGCACGTAGAGGCCGGCTACAAGCTGAACGGCTCGCTGTTGCGCGAAGGCTGCGTCGACGAATTGCTGGTGTAC
CTCGCGCCCAGCCTGCTCGGCAACGACTCCATGAGCATGTTCAACCTGAGCGCGCCGGCAACACTGGAAGGCCGCGTCAA
GCTTGCGTTTCACAACGTCGAGCGGATCGGCGACGATCTGCGGATTCTCGCGCGCTTCGTGCCAACGGGCGGCGCTGCGG
CCGGGTCCGACGCCGCGTCCCCACCCGTTTCGTTTTGA

Protein sequence :
MFSQTDFVHMERALALAKRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDLRGATVYVTLEP
CSHFGRTPPCANALIEAQVARVVAAMEDPNPQVSGRGLAMLRDAGIEVRCGLLANEAQELNIGFVSRMTRGRPWVRMKVA
ASLDGRTGLPSGVSQWITGEAARADGHAWRARASAILTGIGTVREDDPRMTVRAVDTPRQPQRVLIDSQLEVSPQAQILA
GAPTLIFCGNLDERHSERVQALRNRGAEIVEMANAAGKVDLPGMLKVLGERQVNELHVEAGYKLNGSLLREGCVDELLVY
LAPSLLGNDSMSMFNLSAPATLEGRVKLAFHNVERIGDDLRILARFVPTGGAAAGSDAASPPVSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-59 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-59 43