Gene Information

Name : BC1001_2368 (BC1001_2368)
Accession : YP_004228844.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2697467 - 2699398 bp
Length : 1932 bp
Strand : +
Note : KEGG: bgf:BC1003_1090 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCAATCCGAAGTTTCTTTCCGCCGACGCCCACGTCGACGAAGCCGCCGTCGCGCCGCTGCCGAATTCCCGCAA
GGTCTACGTGACCGGCTCCCGTCCCGACATCCGCGTGCCGATGCGCGAAATCACCCAGGCGGACACGCCGGACAGCTTCG
GCGGCGAAAAGAATCCGCCCGTCTATGTCTACGATACGTCCGGCCCCTATTCCGATCCGGACGCGAAAATCGACATTCGC
GCCGGCTTGCCCGCGCTGCGTCAGCGCTGGATCGAAGAGCGCGGCGACACGGAAGCGCTCACCGGCCTCACGAGCGACTA
CGGCCGCGAGCGCGCCGCCGACCCGGCCACCGCTGAACTGCGCTTCCAAGGCCTGCATCGCACGCCGCGCCGCGCGTTGC
CCGGCAAGAACGTCTCGCAGATGCACTATGCGAAGAAAGGCATCATCACGCCGGAAATGGAATACATCGCGATTCGCGAG
AACCAGCGCCGCGCCGAATACCTGGAGAGCCTCAAGACGAGCGGCCCGAACGGCGAAAAGCTCGCCGCGATGATGGGCCG
CCAGCATCCGGGCCAGGCGTTCGGGGCGAGCGCGTTCGGTCCGAACGGCGTGACCGAAATCACGCCGGAATTCGTGCGCG
AGGAAGTGGCGCGCGGCCGCGCGATCATTCCGAACAACATCAATCACCCGGAAAGCGAGCCGATGATTATCGGCCGCAAC
TTCCTCGTAAAGGTGAATGCGAACATCGGCAACTCGGCGGTGACCTCCTCGATCGGCGAGGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGACACGGTCATGGATCTGTCCACCGGCAAGCACATTCACGAAACGCGCGAGTGGATCATCC
GCAATTCGCCGGTGCCGATCGGCACGGTCCCGATCTATCAGGCGCTCGAAAAAGTGAACGGCAAGGCCGAAGACCTGACG
TGGGAAATTTTCCGCGACACGCTGATCGAACAGGCCGAGCAAGGCGTCGATTACTTCACGATCCACGCGGGCGTGCGGTT
GCAATACGTGCCGCTGACCGCGAAACGCATGACCGGCATCGTGTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTCG
CGCATCACAAGGAAAGCTTCCTGTATGAGCATTTCGAAGACATCTGCGAAATCATGAAGCAGTACGACGTGGCGTTCTCG
CTCGGCGACGGCCTGCGCCCCGGTTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAGCTGAAGACGCTCGGCGA
ACTCACGCAGATCGCGTGGAAGCATGACGTGCAGACGATGATCGAAGGCCCGGGCCACGTGCCGATGCAACTGATCAAGG
AAAACATGGACCTGCAGCTGGAATGGTGCGACGAAGCGCCGTTCTACACGCTCGGGCCGCTCACCACCGACATCGCGCCG
GGTTACGACCACATCACGTCGGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCACGGCCATGCTTTGCTATGTGACGCC
GAAGGAGCACCTCGGCCTGCCGAACAAGGACGACGTGAAGACCGGCATCATCACGTACAAGCTCGCCGCGCACGCCGCCG
ACCTGGCGAAGGGCCACCCCGGCGCCCAGGTGCGCGACAACGCGCTCTCCAAAGCGCGCTTCGAGTTCCGCTGGGAAGAC
CAGTTCAACCTCGGCCTCGACCCGGACAAGGCGCGCGAATTCCACGACGAAACCTTGCCCAAGGATTCGGCGAAAGTCGC
GCATTTCTGCTCGATGTGCGGTCCGCACTTCTGCTCGATGAAGATCACCCAGGACGTGCGCGAGTTTGCAGCGCAGCAAG
GCGTCTCCGACGACGAAGCGCTGAAGAAAGGCATGGAAGTAAAATCGATCGAGTTCATGAAGAAAGGCGCTGAAATCTAT
CAGCGGCAGTGA

Protein sequence :
MNANPKFLSADAHVDEAAVAPLPNSRKVYVTGSRPDIRVPMREITQADTPDSFGGEKNPPVYVYDTSGPYSDPDAKIDIR
AGLPALRQRWIEERGDTEALTGLTSDYGRERAADPATAELRFQGLHRTPRRALPGKNVSQMHYAKKGIITPEMEYIAIRE
NQRRAEYLESLKTSGPNGEKLAAMMGRQHPGQAFGASAFGPNGVTEITPEFVREEVARGRAIIPNNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKQYDVAFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQTMIEGPGHVPMQLIKENMDLQLEWCDEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKTGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSDDEALKKGMEVKSIEFMKKGAEIY
QRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72