Gene Information

Name : BC1001_2279 (BC1001_2279)
Accession : YP_004228756.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2590583 - 2591326 bp
Length : 744 bp
Strand : -
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: bgf:BC1003_1179 lipoprotein releasing system, ATP-binding protein; SMART: ATPase AAA

DNA sequence : 
ATGAATGACCGTTCCGCAACTTTATCCATGGCCGCTCAGGAAATGACGCCGCATCCCTACGTGCTGGAAGCGACCGGCAT
TTCGAAGTCCTTCGTGCAGGGCGGGCTGAACGTCCAGGTGCTCAACAACACGCAACTGAGCGTGCGGCGCGGCGAGAAGC
TCGCGATCGTCGGCGCGTCGGGTTCGGGCAAGAGCACGCTGCTGCACGTGCTCGGCGGTCTCGACGACCCGAGCGCAGGC
CATGTCTCGGTGATGGGCAAGCCGTTCACGCAACTCTCCGAGCGCGAACGCAACGACCTGCGCAATCGCGCGCTCGGCTT
CGTGTATCAGTTTCATCATCTGCTGCCGGAGTTTTCCGCGCTCGATAACGTCGCGATGCCGCTGCGCATCCGCCGCATGA
CGACGGAAGCCTCGCGCCGCGAGGCGCTCGCGGTGCTGGAGCGGGTCGGCATGGCGCATCGCGCGAAGCATCGGCCGGGC
GAGCTGTCGGGCGGCGAGCGTCAGCGCGTGGCGATCGCGCGGGCGCTCGTCACGAAACCGGCCTGCGTGCTCGCCGACGA
ACCGACCGGCAACCTCGACGGCAGCACGGCCGACACGGTCTTCAATCTGATGCTCGAACTGTCGCGAACGCTCGAAACGA
GCTTTGTGATCGTCACGCACGACCCGGAACTGGCGGGGCGCTGCGATCGCATCATGCGCTTGCGCGACGGCGTTCTGTAC
GAAGAGCCGCCCGTGCCGGTGTGA

Protein sequence : 
MNDRSATLSMAAQEMTPHPYVLEATGISKSFVQGGLNVQVLNNTQLSVRRGEKLAIVGASGSGKSTLLHVLGGLDDPSAG
HVSVMGKPFTQLSERERNDLRNRALGFVYQFHHLLPEFSALDNVAMPLRIRRMTTEASRREALAVLERVGMAHRAKHRPG
ELSGGERQRVAIARALVTKPACVLADEPTGNLDGSTADTVFNLMLELSRTLETSFVIVTHDPELAGRCDRIMRLRDGVLY
EEPPVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_2279 YP_004228756.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 4e-32 43
BC1001_2279 YP_004228756.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-38 41