Gene Information

Name : BC1001_2240 (BC1001_2240)
Accession : YP_004228717.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2546148 - 2548490 bp
Length : 2343 bp
Strand : +
Note : KEGG: bgf:BC1003_1218 Tex-like protein protein-like protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1

DNA sequence :
ATGACGGAAACCGTAGCACTCAAGATCGTCCAGCGCATCGCCGCCGAACTGTCCGTCCAGCCGCGCCAGGTCGCGGCCGC
GGTGGAACTCCTCGACGAAGGAGCGACTGTTCCGTTCATCGCGCGCTACCGTAAGGAAGTGACCGGCAATCTCGACGACA
CGCAGTTGCGCAACCTCGAAGAGCGCCTGCTGTATCTGCGCGAGCTGGAAGACCGCCGCGCGGCGATCATCGCGAGCATC
GACGAACAGGGCAAGCTCACCGACGAACTGCGCGCTGCGATTGAAGGCGCCGACAGCAAGCAGGTGCTCGAAGACCTGTA
TCTCCCGTACAAGCCGAAGCGCCGCACGCGCGCGCAGATCGCCCGCGAAGCCGGCCTGCAGCCGCTCGCCGACGCGCTGC
TCGGCAATCCCCTGCTCGACCCGCAAACCGAAGCGGCGGCCTACGTGGACGCCGAGAAAGGCGTGGCCGACGTCAAGGCC
GCGCTCGACGGCGCGCGCGACATTCTCTCCGAGCAGTTCGGCGAAACCGCCGAGCTGCTCGGCAAGTTGCGCGATTACCT
GTTCAACCAGGGCGTGGTGTCGTCGAAAGTGGTCGAAGGCAAGGAAACCGCTGAAGAAGAAAAATTCCGCGACTACTACG
ACTACGCGGAAACGCTGCGCACCGTGCCGTCGCATCGCGCGCTCGCGCTGTTCCGCGGCCGCAATGCCGGCGTGCTGATG
ATCAAGCTCGGCCTCGGCGAAGAACTGGACGCACAGGTGCCGCATCCGGGCGAGGCGCTGATCGCACGTCATTTCGGCAT
TGCCAATCAGAACCGTCCCGCCGACAAATGGCTTTCGGACGTGTGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCACC
TCGAAAACGAGTTGCTGACCAACTTGCGCGACGAAGCCGAGCACGAAGCGATTCGCGTGTTCGCGCGCAATCTGAAGGAC
CTGTTGCTGGCCGCGCCGGCAGGACCGAAGGCCGTGATCGGCCTCGATCCGGGCTTGCGCACCGGCGTGAAGGTGGCCGT
GGTCGACCGTACCGGCAAAGTGCTCGCCACCGACACTATCTACCCGCACGAGCCGCGCCGCGACTGGGAGGGCTCCCTCG
CCAAACTCGCGCGACTGTGCGCGCAAACGCAGGCCGAACTGATCAGCATCGGCAACGGCACGGCCTCGCGTGAGACGGAC
AAGCTCGCGAGCGAGCTGATCGCGCGTCATCCGGAACTGAAGCTGCAGAAGATCGTCGTCTCCGAGGCGGGCGCGTCCGT
GTACTCGGCGTCGGAACTGGCGGCCAAGGAGTTTCCGGACATGGACGTGTCGCTGCGCGGCGCGGTGTCCATCGCGCGTC
GCCTGCAAGACCCGCTCGCGGAGCTCGTGAAGATCGAGCCGAAGGCGATCGGCGTGGGCCAATATCAGCACGACGTCAAC
CAGCGCGAACTGGCGCGCTCGCTCGACGCCGTGGTCGAGGACTGCGTGAACGCGGTCGGCGTGGATGCGAATACCGCGTC
GGTCGCGTTGCTCGCGCGCGTGTCGGGACTCAACGCCACGCTGGCGCGCAACATCGTCGACTATCGCGACGCGAACGGCC
CGTTCCCGTCGCGCGAGCATCTGCGCAAGGTGCCGCGTCTCGGCGACAAGACATTCGAACAGGCGGCGGGCTTTTTGCGG
ATCAACAACGGCGAAAATCCGCTCGACCGCTCGTCGGTGCACCCGGAAGCGTATCCGGTCGTCCAGCGGATTCTTGCAAA
GATCAACAAGCAGGCCGGCGAGGTGCTCGGCAACCGCGACGCGCTGCGCGGCCTGTCGCCCGCCGAATTCGTCGACGATC
GTTTCGGTCTGCCGACGGTGCGCGATATTCTGCTCGAACTGGAAAAGCCGGGCCGCGATCCGCGTCCGGAATTCAAGACC
GCGACGTTCCGCGAAGGCGTCGAAAAGGTCAGCGACCTGACGCCCGGCATGGTGCTCGAAGGCGTGGTGACCAACGTGGC
CGCATTCGGCGCGTTCATCGACGTGGGCGTGCACCAGGACGGTCTCGTGCACGTGTCGGCCATGTCGACGAAATTCATCA
AGGATCCGCACGAGGTCGTGAAGGCCGGGCAGATCGTCAAGGTCAAGGTGCTCGAAGTCGACGTGAAGCGGCAACGTATT
GCGCTCACCATGCGTCTTGACGACGAGTTCGGCGCGGCCGCGGCTCGCAGCGGCGGCAGCCAGCAGGATCGCGGCAGCTT
CGGCCGTTCGGGCGGCAACGGACGCGGCGCGCCGCAACGCGCGCGCGAACCCGAACCGGGCGGCGCAATGGCCGCGGCGT
TTGCCAAGCTCAAGCAGAAGTAA

Protein sequence :
MTETVALKIVQRIAAELSVQPRQVAAAVELLDEGATVPFIARYRKEVTGNLDDTQLRNLEERLLYLRELEDRRAAIIASI
DEQGKLTDELRAAIEGADSKQVLEDLYLPYKPKRRTRAQIAREAGLQPLADALLGNPLLDPQTEAAAYVDAEKGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLFNQGVVSSKVVEGKETAEEEKFRDYYDYAETLRTVPSHRALALFRGRNAGVLM
IKLGLGEELDAQVPHPGEALIARHFGIANQNRPADKWLSDVCRWCWRVKVQPHLENELLTNLRDEAEHEAIRVFARNLKD
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWEGSLAKLARLCAQTQAELISIGNGTASRETD
KLASELIARHPELKLQKIVVSEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLR
INNGENPLDRSSVHPEAYPVVQRILAKINKQAGEVLGNRDALRGLSPAEFVDDRFGLPTVRDILLELEKPGRDPRPEFKT
ATFREGVEKVSDLTPGMVLEGVVTNVAAFGAFIDVGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVKVKVLEVDVKRQRI
ALTMRLDDEFGAAAARSGGSQQDRGSFGRSGGNGRGAPQRAREPEPGGAMAAAFAKLKQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63