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Name : BC1001_1953 (BC1001_1953) Accession : YP_004228442.1 Strain : Genome accession: NC_015136 Putative virulence/resistance : Unknown Product : conjugal transfer protein, TraD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 2233046 - 2235193 bp Length : 2148 bp Strand : - Note : KEGG: ngk:NGK_1090 TraD DNA sequence : ATGGCATATCCGGTCGAGAACCTCTTTCGCAGGCCCGTTGAACTGCTGTCCTCCGTGGCTGCGCTCGCTGCAACCGGCAT CCTCTGGTCCCACCCGGCGCTCTTCCTCATCACGCCCGCAACGGGCGGCGTCACGACGCTTGCGCTCCTGTCACTGGCCT GCGTTCGCGGGCGACAGGCAGGGCGATTGATCCGCTTCCAGCGCAACTTGCGGCGCCTGCCGCAATATCTCATTCCCGCG GCCGAGATTCCGAACTCGGCGAGCGAGGTGTTTCTCGGGCGAGGCTTTCGCTGGAGCGTCATTCACACGCAGCGGCTTTA TCAAGCCCGCTTTCCCGAAAACCGCTGGCTGCTTGCCCGCAATGATCTGTACGACCGGGCGCGCGATCACGAGCGTCGGC ATCCCGACAGCCGGATCGCGCAAGTGACCCGTCGCCAGGCGTGGTGGAATCCGGTGGCGCCGTTGCCGCCCGTCGGTGGT GATCCGGCATTGCATGGCGTCGAACCTGAAGAGCGGGACATCTGGTTCGACGTTGGCGAGCGTGTCGGGCACATGGCGGT GCTGGGCACGACGCGCGTGGGCAAGACCCGGCTGTGCGAGGTCCTGGTTACGCAGGACATTCGGCGCGGTGACATCGTGA TCGTGTTCGATCCGAAGGGCGACGTCGATCTGCTGCTGCGCATGTACACCGAGGCGAAACGCTGTGGGCGGGAAAGCGAG TTCACGTTCTTCCATCTGGGCTATCCCGACAAATCGGCGCGCTATAGCCCGATTGGCACGTACTCGCGGATCACGGAGGT AGCGACACGCATCGCCGGCAACCTGCCCAAGGAGGGCCAGTCGGCCGCTTTCCGCGACTTCGTCTGGCGTTTCGTGAACG TGATGGCCCGCGCCATGAGTGCACTCGGCATCCGTCCGACCTACGAGATGATCTACCAGAACGCGGTGAACATCGACGGA CTCGCGTTACGGTACTTCCGCTTCTGGCTCGATCGCACCCGTCCGGATTGGGAGGAGGGGCTGGAGCCGCTGGACAAGGA AGAAGCGAAGCAGGCGATGCGATTGCAACGCAACCAGGAAGTCTTGCAGGTCGCGAACCTGATCCGGCAGCAGGGCTGGA CCGATCCGATCGCCAATGGGCTGCTGTCGGTGATCAGCAACGAGCGCTCGTACTTCGACAAGCTGGTCTCGTCGCTCTAT CCGCTCCTGGAAAAGCTCACCACAGGCCGGACGTCGGAGCTGCTGTCACCCGACTATGACGACCCCCATGATCCGCGACC CGTGTTCCACTGGAACCGCGTGATGGACCGCGGCGGCATTGTGTATGTCGGGCTCGACGCGCTGTCCGACTTCGAGGTCG CGGGCGTGGTCGGCAACGCCATGTTCGCGGACCTGACGTCGACCGCGGGCCGCATCTACAAGTACGGGCACAGCTACGGA CAGAGCGCGGTGGGCGGCCGGCGGCGCGTGTCGATCCATGCCGACGAATTCAACGAACTGGTAGGCGATGAGTTCGTGCC GATGGTCAACAAGGCGGGCGGCGCCGGTTATCAGGTCACGGCCTACACGCAAACAAGTGCCGATCTTGAAGCCAGGATCG GCTCACGGGCGAAGGCCGAACAGATTTTCGGGAATTTCAACACGCTTGTGATGCTGCGCGTGAAGTACGTCACCACCGCG AAGATCCTGACCGACCAGCTTCCGATGGTCGATGTGAAGTCGCTCACGCTCGCGTCGTCGGCGACGGACGCGGTGCGGCG CGGCGAGGGCGTACATTTCACGGCCCAGACGCATGACCAGATCTCGGTGCGACAGGTGCCGATGCTGCAGGCGTCCGACC TGACGCAACTGCCGAAGGGGCAGGCGTTCGCGCTGATCGAGGGCGGCCAGCTGGTGAAAGTGCGGCTGCCCTTGCTCGAC GCGCATGACCCGGTCATGCTGCCGGGGCTCGATGATGTAGTGGCCGACATGCGCTCGCGCTATGCGTCGTATGTCCAGGC CGTCTCGCCATTCGATGACGCGGGCGGCGTATCGCCCGATGCCATTGGTGGCACGGTGGGCAGCTTCATGCCGGTCGATG CGGATGCTCGGCCGCAAACCTCGACCTCCGGTCCCTGGGCCGTGGAAGGCAAGGGCGCCGGGTTCTGA Protein sequence : MAYPVENLFRRPVELLSSVAALAATGILWSHPALFLITPATGGVTTLALLSLACVRGRQAGRLIRFQRNLRRLPQYLIPA AEIPNSASEVFLGRGFRWSVIHTQRLYQARFPENRWLLARNDLYDRARDHERRHPDSRIAQVTRRQAWWNPVAPLPPVGG DPALHGVEPEERDIWFDVGERVGHMAVLGTTRVGKTRLCEVLVTQDIRRGDIVIVFDPKGDVDLLLRMYTEAKRCGRESE FTFFHLGYPDKSARYSPIGTYSRITEVATRIAGNLPKEGQSAAFRDFVWRFVNVMARAMSALGIRPTYEMIYQNAVNIDG LALRYFRFWLDRTRPDWEEGLEPLDKEEAKQAMRLQRNQEVLQVANLIRQQGWTDPIANGLLSVISNERSYFDKLVSSLY PLLEKLTTGRTSELLSPDYDDPHDPRPVFHWNRVMDRGGIVYVGLDALSDFEVAGVVGNAMFADLTSTAGRIYKYGHSYG QSAVGGRRRVSIHADEFNELVGDEFVPMVNKAGGAGYQVTAYTQTSADLEARIGSRAKAEQIFGNFNTLVMLRVKYVTTA KILTDQLPMVDVKSLTLASSATDAVRRGEGVHFTAQTHDQISVRQVPMLQASDLTQLPKGQAFALIEGGQLVKVRLPLLD AHDPVMLPGLDDVVADMRSRYASYVQAVSPFDDAGGVSPDAIGGTVGSFMPVDADARPQTSTSGPWAVEGKGAGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 8e-171 | 57 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-139 | 52 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-140 | 52 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 2e-135 | 52 |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-142 | 51 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 3e-137 | 50 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 2e-136 | 50 |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 6e-141 | 50 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-143 | 49 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 1e-143 | 49 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-144 | 49 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 4e-144 | 49 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 2e-143 | 49 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 7e-137 | 49 |
