Gene Information

Name : BC1001_1058 (BC1001_1058)
Accession : YP_004227563.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1187456 - 1188202 bp
Length : 747 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_2345 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGACCCGAACCGTTCTGATCACCGGCGGCAGCCGCGGCATAGGCCGGGCGACCGCGCGCCTGCTTGGCGCGCGCGGCTG
GTCGGTCGGCGTGAACTACGCTCAGAACCTGGCAGCGGCGCAAGAAACCGTCGCCGAAGTCGAGCGGGCCGGCGGACGCG
CGCTGCCCATTGCGGGCGACGTCGCGAGCGAAGCCGACGTGCTCGCCATGTTCGACGCCGTTCAGGCGCAGTTCGGCCGG
CTCGACGCGCTCGTCAACAACGCGGGCATCGTGGCGCCGTCCATGCCGCTCGCCGACATGGATCTCGCGCGGCTCACGCG
CATGTTCAACGTCAACGTGCTGGGCGCGTATCTCTGCGCGCGCGAAGCCGCGCGGCGCATGTCGACGGATCGCGGCGGCG
CGGGCGGTGTGATCGTGAATGTGTCGTCGGCGGCGGCGCGTTTGGGGTCGCCCAACGAGTACGTCGACTACGCGGGCTCC
AAAGGCGCGGTCGACACCCTGACGCTCGGTCTCGCCAAAGAACTGGGGCCGCGCGGCGTGCGCGTGAATGCGGTACGGCC
CGGCCTCATCGATACCGAGATTCATGCGAGCGGCGGCAAGCCGGAGCGCGCCGCCCAGCTCGGCGCAGCCACACCGTTGG
GCCGTCCCGGCAGCGCGGACGAGGTCGCCGAGACCATCGTCTGGCTGATGAGCGACGCCGCGTCGTACGTCACCGGCGCG
TTGCTCGACGTGTCCGGCGGCCGCTAG

Protein sequence :
MTRTVLITGGSRGIGRATARLLGARGWSVGVNYAQNLAAAQETVAEVERAGGRALPIAGDVASEADVLAMFDAVQAQFGR
LDALVNNAGIVAPSMPLADMDLARLTRMFNVNVLGAYLCAREAARRMSTDRGGAGGVIVNVSSAAARLGSPNEYVDYAGS
KGAVDTLTLGLAKELGPRGVRVNAVRPGLIDTEIHASGGKPERAAQLGAATPLGRPGSADEVAETIVWLMSDAASYVTGA
LLDVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-61 52
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 7e-55 51