Gene Information

Name : BC1001_1024 (BC1001_1024)
Accession : YP_004227530.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Virulence
Product : F plasmid protein 32
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1147255 - 1148088 bp
Length : 834 bp
Strand : -
Note : KEGG: bxe:Bxe_A2571 F plasmid gene 32-like protein

DNA sequence :
ATGCAACTCGCTTCCTCTTTCCATTACGGCTCCCCGATGTTCCGCGCCGACTCGCCCCTGTCGGACGACCAGATCCATCG
TGTCGCCCCGTCCATCTTCGCAGACAGCAAGCACGAAAGCCGCTCGGAACGCTACACCTACATTCCGACCATCGACGTGC
TGCGCGGCCTGCGCAATGAAGGTTTCCGGCCGTTCATGGTCTGCCAGACGCGCGTGCGCGACGAAAGCAAGCGCGAATAC
ACGAAGCACATGCTCCGGCTTCGCCACGCTGACCAGATCATCGGCGACGAGGCCAACGAAATCGTGCTACTAAACTCGCA
CGACGGCACGAGCAGCTACCAGATGCTCGCGGGCGTGCTGCGTTTCGTCTGCCAGAACGGTATGGTGGCGGGCGACAACA
TCCGGGACATCCGCGTACCGCACAAGGGCAACATCGTCCAGAACGTCATCAACGGCGCATTCGATGTGCTCGACGGCTTC
GACCTGATCCGCGAGCAGAAGGACGGCATGCGCGCCGTCGAACTGAACCGCGACGAACAGCAGGCGTTCGCCCGCTCCGC
ACTCGCGCTGCGCTACGACCCGACCGACGCCGAAGCACCCGCCCCCATCACCGACAGCCAACTGCTCGCCCCGCGCCGCT
TCGAGGATCGTCGCGACGATCTCTGGACGGTATTCAACCGCGTACAGGAAAACCTCACCAAGGGCGGCCTGCGGGGGCGC
TCGCGTAACGGGCGCGCGGTATCCACACGCCCCATCACAAGCATCGACCAGAACGTGAAGCTCAACCGCGCGCTGTGGAT
GCTCGCTGACGCCATGCTCCAGATGAAGGCGTAA

Protein sequence :
MQLASSFHYGSPMFRADSPLSDDQIHRVAPSIFADSKHESRSERYTYIPTIDVLRGLRNEGFRPFMVCQTRVRDESKREY
TKHMLRLRHADQIIGDEANEIVLLNSHDGTSSYQMLAGVLRFVCQNGMVAGDNIRDIRVPHKGNIVQNVINGAFDVLDGF
DLIREQKDGMRAVELNRDEQQAFARSALALRYDPTDAEAPAPITDSQLLAPRRFEDRRDDLWTVFNRVQENLTKGGLRGR
SRNGRAVSTRPITSIDQNVKLNRALWMLADAMLQMKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-91 65
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 3e-91 64
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 5e-69 52
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-68 52
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-69 52
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-69 52
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-69 52
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-69 52
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 7e-70 52
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-69 52
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-71 52
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 7e-70 52
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-67 52
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-67 52
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-67 52
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-67 52
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-68 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1001_1024 YP_004227530.1 F plasmid protein 32 VFG1676 Protein 2e-68 52
BC1001_1024 YP_004227530.1 F plasmid protein 32 VFG1615 Protein 2e-68 52
BC1001_1024 YP_004227530.1 F plasmid protein 32 VFG0658 Protein 3e-70 52
BC1001_1024 YP_004227530.1 F plasmid protein 32 VFG1526 Protein 1e-67 52