Gene Information

Name : BC1001_1012 (BC1001_1012)
Accession : YP_004227518.1
Strain :
Genome accession: NC_015136
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1133446 - 1134186 bp
Length : 741 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5041 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGAAATTGAACGGTAAGGTCGCTATAGTCACGGGCGCCGGCCAGGGAATTGGCGCTGCGACGGCACTCAAATTCGCTCA
GGAGGGGGCCACCCTTGCTCTGTGCGACCTGAACGCGGAAGCCGTAAGCTCGGTCGTCGACGCCTGTCGGGCGGCCGGTG
CCACGGCTGTAGGCTTTGCCGTCAACGTTGCCAACCGTGAAGCTATCCAGGACATGGCTGCGTCAGTGCGAGCCCGATTT
GGACGGATCGACGTCCTTGTGAATAACGCTGGTATCACACGGGATGCTCGGCTTCAGAAGATGACGCCGGAGCAGTTCGA
CCAAGTTATTGATGTGAACCTTAGGGGCGTCTTCAATGCAACGCAAGCCGTAGTCGAAACCATGATCGAACAAAATGCGG
GTGTGATCCTCAATGCAAGTTCTGTCGTGGGTATCTATGGCAATTTCGGACAGACCAACTACGCTGCGGCCAAGTTCGGC
GTTATTGGATTCACAAAAACGTGGAGTCGCGAACTCGGACCGAAGGGCATCCGCGTGAACGCGGTAGCTCCGGGCTTTAT
TGACACGCCGATTCTTGAAACGGTGCCCAACGAAGTGCTCGAGAAAATGTGCGTCCAGGTTTCGTTGCGTCGATTAGGTA
AGCCGGAGGAAATTGCCAACATCTACGCGTTTCTTGCTAGTGACGAGGCGAGCTATATCAACGGTGCCGTTATCGAGGCT
TCCGGAGGCATGACGCTTTAG

Protein sequence :
MKLNGKVAIVTGAGQGIGAATALKFAQEGATLALCDLNAEAVSSVVDACRAAGATAVGFAVNVANREAIQDMAASVRARF
GRIDVLVNNAGITRDARLQKMTPEQFDQVIDVNLRGVFNATQAVVETMIEQNAGVILNASSVVGIYGNFGQTNYAAAKFG
VIGFTKTWSRELGPKGIRVNAVAPGFIDTPILETVPNEVLEKMCVQVSLRRLGKPEEIANIYAFLASDEASYINGAVIEA
SGGMTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-31 41